| Tag | Content |
|---|
EnhancerAtlas ID | HS121-00522 |
Organism | Homo sapiens |
Tissue/cell | LNCaP |
Coordinate | chr1:8424900-8425870 |
Target genes | |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| NR2F1 | MA0017.2 | chr1:8424988-8425001 | CCTGTGACCTCTG | - | 6.19 | | ZNF263 | MA0528.1 | chr1:8425453-8425474 | GAAGCAGGAGGAAAAAGAAGA | + | 7.1 |
|
| | Number of super-enhancer constituents: 9 | ID | Coordinate | Tissue/cell |
| SE_01103 | chr1:8422355-8425425 | Adrenal_Gland | | SE_07921 | chr1:8424990-8428578 | Brain_Inferior_Temporal_Lobe | | SE_11329 | chr1:8425719-8428216 | CD20 | | SE_40658 | chr1:8421188-8437093 | Left_Ventricle | | SE_42166 | chr1:8422484-8426961 | Lung | | SE_48103 | chr1:8422570-8425542 | Psoas_Muscle | | SE_48600 | chr1:8421827-8428361 | Right_Atrium | | SE_53408 | chr1:8422341-8425229 | Spleen | | SE_54819 | chr1:8422338-8425670 | Stomach_Smooth_Muscle |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I008362 | chr1 | 8422787 | 8425296 |
|
Enhancer Sequence | GGGCGTGGCA GGCACATAGT GGGGGTGGGG GAGACACCAT CATGCTCAGC CAAGGCTGGG 60
CCGGTGGGGT GGGGGGGAGG GGGGAACACC TGTGACCTCT GGCCTACTGC AGGTTCTGGC 120
CACCAGTCAG AGCGGCTGGG TGCACAGGCT GAGGTAGGAC AGTGTCTGCA AAGGACCACT 180
TCGAGCTCCT CAGTGTCAGT CACCAGGACA GAGGGCCTGT GTGTGAGGCG CCATACCCAA 240
GGGCCTGCCC TGCCACTGAT GCCCGTAACG GGTGAGTCTG AACTGGGACA AGCGCGTCCA 300
TGCTGCCTCC CTCCCTAATA CGCCCAGGCA ATCCTGAGAA ATTCCAACTT CACCGAGCGC 360
CCCCAACCCG TCCTGCTAGG TGATTTCTAG TCGCCTGCAT GCGCAACACC GGCGCCCCTC 420
AGGTTCAGCG TCCCGGGCCA GGACAGAGCT ATAAGGCACT TTTGCTACAC CCCAGTTTTT 480
TAGGGGTGAG AAGGTGTGGG CTCCAGCATC ATTAGATTGT ACATCATACT GGGACCAAAA 540
AGAGGATCTT GGTGAAGCAG GAGGAAAAAG AAGAAAGTGT TAATCTGATC TTCTTACAAC 600
CAAAAGTGCA ATGAGAATTC AAGCAGGACA TCAAGTACAT CATCTGTCAA ATGGAAAACC 660
TTCCCAGGAC AAGGCCAAAA ACATCCCAGG CCAAGACGTG TATTTTTTGT AAAAACCTAA 720
GATGATGTTG AGTTTATGAG AAATATTTAA ATGTACAAAT AATGTTTTAA AGTCTCCCTC 780
CTGAATCCTT GTCCTGCTCC CCGCCCCCAC CATCGGTCTA TGTTTAGGTC AGGCTTCACA 840
CATGCACTGG AGCACGGGTG CACACCCCCT CATGCTTCCC GGAGCCATCA GCTCCTACGG 900
GCCCAGAGTG GGACAGGCTG CCCGTGAACA GTCTCCCCTC CGCCCACTGT GATGCCAAGA 960
CCCCTACTCA 970
|
