Tag | Content |
---|
EnhancerAtlas ID | HS120-06328 |
Organism | Homo sapiens |
Tissue/cell | LNCaP-abl |
Coordinate | chr9:139434000-139434710 |
Target genes | Number: 17 | Name | Ensembl ID |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
KLF16 | MA0741.1 | chr9:139434375-139434386 | GCCACGCCCCC | + | 6.62 | Nr2f6(var.2) | MA0728.1 | chr9:139434060-139434075 | TGAACTCCTGACCTC | - | 6.22 | SP1 | MA0079.4 | chr9:139434372-139434387 | GAAGCCACGCCCCCA | + | 7.32 | SP3 | MA0746.2 | chr9:139434374-139434387 | AGCCACGCCCCCA | + | 6.34 | SP4 | MA0685.1 | chr9:139434372-139434389 | GAAGCCACGCCCCCAGT | + | 6.91 | SP8 | MA0747.1 | chr9:139434375-139434387 | GCCACGCCCCCA | + | 6.11 |
|
| Number of super-enhancer constituents: 28 | ID | Coordinate | Tissue/cell |
SE_00323 | chr9:139431145-139440359 | Adipose_Nuclei | SE_01312 | chr9:139433899-139434340 | Adrenal_Gland | SE_01312 | chr9:139434362-139435932 | Adrenal_Gland | SE_04058 | chr9:139432756-139440378 | Brain_Anterior_Caudate | SE_05120 | chr9:139433011-139440410 | Brain_Cingulate_Gyrus | SE_05830 | chr9:139432290-139440538 | Brain_Hippocampus_Middle | SE_06959 | chr9:139432305-139442008 | Brain_Hippocampus_Middle_150 | SE_08378 | chr9:139434113-139440082 | Brain_Inferior_Temporal_Lobe | SE_09731 | chr9:139432626-139435923 | CD14 | SE_23278 | chr9:139434016-139437030 | Colon_Crypt_1 | SE_23785 | chr9:139434035-139435800 | Colon_Crypt_2 | SE_24688 | chr9:139432529-139436882 | Colon_Crypt_3 | SE_26827 | chr9:139432502-139436847 | Esophagus | SE_30179 | chr9:139432771-139437058 | Fetal_Muscle | SE_32032 | chr9:139432497-139436952 | Gastric | SE_34452 | chr9:139433162-139436540 | HCT-116 | SE_41264 | chr9:139432669-139442661 | Left_Ventricle | SE_41775 | chr9:139433991-139435881 | LNCaP | SE_42178 | chr9:139432413-139442985 | Lung | SE_47602 | chr9:139434054-139435209 | Pancreas | SE_48804 | chr9:139433976-139437079 | Right_Atrium | SE_50167 | chr9:139432326-139443346 | Sigmoid_Colon | SE_52818 | chr9:139432556-139436996 | Small_Intestine | SE_53667 | chr9:139430279-139442814 | Spleen | SE_54755 | chr9:139433001-139435408 | Stomach_Smooth_Muscle | SE_57110 | chr9:139434282-139435009 | VACO_400 | SE_62991 | chr9:139423110-139447563 | Tonsil | SE_65497 | chr9:139432937-139437004 | Pancreatic_islets |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
Enhancer Sequence | TGGGTAATTT TTGTATTTTT AGTAGAGACG GGGGTTTCGC CATGTTGGCC AGGCTGGTCT 60 TGAACTCCTG ACCTCAGGTG ATCTGCCCAC CTCGGATGCT GCATGTTTTT AAACATGTTT 120 TTCTAACCCT GGCGCCCTTG AAGACCAGGT TCTGCATAAA CAGGAGGTCC TGTCACAGGC 180 CTTTCCGCTC AGCTCAGCAT GAGGAGGAGA ATCAACCTGT TCCTCCCCTG GCCACGCCCA 240 AGACGAGGCA GGTGACTCAA TGGAAAGAGC CAGACCGGGT GACAGGAGCT ACCCCGTCCC 300 TCCCCAGCCT CCCAGGCCGG CTGCAGGGCC AAGTCACTTC CCGCCTGAGC CTCCTTCCTC 360 TTCTTTTAAG GGGAAGCCAC GCCCCCAGTC CGCTTGTAGT CGGGAAATGA CGGGGCAGCT 420 CAGGCTGGCT GGGGCTGTGT TTAGGGACAT TCGCTTGGGA GAAGGAGAGG GGCAGGGCTA 480 GTAGGAATTC TGCCACTGCT GTGTGACCCT GGGGCTGATG GCGACTTCTC TGGGTCTCTT 540 CTTCTCACTT ATCGGTGCCT GATCCAGACA GCTTTACGGG GCTGCCGGGA GCTATGCCAG 600 GCCACCACCG GGCCGGCACA CCCCCAACAT GTCCCACATG TGAGCTAGGT GCCTCTCTCA 660 CGCCTTGCTG GGAAGTGAAC TCCACAGGAG CAGGGGCCAT GTCTGCCCTG 710
|