Tag | Content |
---|
EnhancerAtlas ID | HS120-06024 |
Organism | Homo sapiens |
Tissue/cell | LNCaP-abl |
Coordinate | chr8:48647440-48647860 |
Target genes | |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
ELK1 | MA0028.2 | chr8:48647479-48647489 | ACCGGAAGTG | + | 6.02 | ERG | MA0474.2 | chr8:48647479-48647489 | ACCGGAAGTG | + | 6.02 | ETS1 | MA0098.3 | chr8:48647479-48647489 | ACCGGAAGTG | + | 6.02 | FEV | MA0156.2 | chr8:48647479-48647489 | ACCGGAAGTG | + | 6.02 | FLI1 | MA0475.2 | chr8:48647479-48647489 | ACCGGAAGTG | + | 6.02 |
|
| Number of super-enhancer constituents: 18 | ID | Coordinate | Tissue/cell |
SE_01206 | chr8:48646051-48648186 | Adrenal_Gland | SE_03016 | chr8:48646489-48648190 | Bladder | SE_23445 | chr8:48646657-48651956 | Colon_Crypt_1 | SE_23902 | chr8:48647426-48648135 | Colon_Crypt_2 | SE_24719 | chr8:48646529-48651879 | Colon_Crypt_3 | SE_26154 | chr8:48644993-48652277 | Duodenum_Smooth_Muscle | SE_27037 | chr8:48645993-48652041 | Esophagus | SE_31704 | chr8:48645947-48652079 | Gastric | SE_41157 | chr8:48646025-48651934 | Left_Ventricle | SE_42392 | chr8:48645847-48652126 | Lung | SE_45425 | chr8:48646711-48652135 | NHLF | SE_46870 | chr8:48646074-48648106 | Ovary | SE_47851 | chr8:48646620-48648170 | Pancreas | SE_49039 | chr8:48645876-48648363 | Right_Atrium | SE_50591 | chr8:48645856-48652052 | Sigmoid_Colon | SE_52626 | chr8:48645915-48652128 | Small_Intestine | SE_53550 | chr8:48645882-48652124 | Spleen | SE_54930 | chr8:48645754-48652186 | Stomach_Smooth_Muscle |
|
Enhancer Sequence | AGGAAGGAAG TTTGGGGCAA AGCACCAGGA AATCCCTCAA CCGGAAGTGT TGCTAGATTG 60 AGGAAGTGTC CTAAAGGAAG TGGGAGACAG CTGTGGGCAC TGTGTGCCCA GCCCCGGCCT 120 TCCCAGCAGA GTCTGTGTGC ATCGTGTCCC AAGTAAAAAC AATTCAGTTA CCAGAATGGG 180 GTAGTTCCTT CACTTGCTAA AATAAATGGG TGTGTGGGTG TGTGTGTGTG TGGGTGTGTG 240 TGTGTGTGTG TGTGTGTAGT GGCTCTTCAT TTGTTTCTCC TTCCTACCAC TGTTCTCAGC 300 CATTTGAGGA GTGGAAGGTC GTGGACTGGG GAAAGGGCCT TCCACTCTGG CTCTCTGGTT 360 TTCCGTGTTG TTGGGAACAG TACGTCCCAG GCTGTTTGCT TTAACCAGCG TGCCTTTTAT 420
|