| Tag | Content |
|---|
EnhancerAtlas ID | HS120-05562 |
Organism | Homo sapiens |
Tissue/cell | LNCaP-abl |
Coordinate | chr6:109702820-109703400 |
Target genes | |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| E2F6 | MA0471.1 | chr6:109703376-109703387 | GGGCGGGAAGC | + | 6.02 | | YY1 | MA0095.2 | chr6:109703257-109703269 | GCCGCCATGTTG | - | 6.37 |
|
| | Number of super-enhancer constituents: 15 | ID | Coordinate | Tissue/cell |
| SE_12971 | chr6:109699268-109706739 | CD34_Primary_RO01480 | | SE_13577 | chr6:109695944-109707090 | CD34_Primary_RO01536 | | SE_14311 | chr6:109700742-109706725 | CD34_Primary_RO01549 | | SE_15137 | chr6:109698532-109706205 | CD4_Memory_Primary_7pool | | SE_20663 | chr6:109700232-109706194 | CD56 | | SE_21383 | chr6:109700237-109706707 | CD8_Memory_7pool | | SE_21900 | chr6:109701297-109705195 | CD8_Naive_7pool | | SE_25031 | chr6:109701342-109706795 | Colon_Crypt_3 | | SE_28361 | chr6:109700714-109706852 | Fetal_Intestine | | SE_29282 | chr6:109700345-109706958 | Fetal_Intestine_Large | | SE_30399 | chr6:109701605-109705463 | Fetal_Muscle | | SE_35177 | chr6:109701024-109706775 | HeLa | | SE_40423 | chr6:109701593-109704726 | K562 | | SE_53245 | chr6:109702226-109706409 | Small_Intestine | | SE_53876 | chr6:109702229-109706262 | Spleen |
|
Enhancer Sequence | TCAGCTACAT TCTATTCCTA TCTGCAAAAC CAATGTAATT AAATCTCAAG CGACCTTCTC 60
AGACTCAAGT CTGAGACACG AACGAGCATT ACCGTCTTTA AGTTTCTCTT TCCCGGACTT 120
CCGGAGAAGG CTACCTCCGG AGAGAGGCGC CGGGAGGGTG AACAACCAGT GGCAGGGAGA 180
GGCAGCTCGG CCCCACCGCC AACCTCAGAG GCGCGACGCC CGGCCCCATC CTCAACCCCA 240
CCGCTGCCCC CGCGGAAGGA AGCCACGTCC CCATTTCCGA CCCCAAGTGA GGCTAGGAAT 300
TACGATGCAC TTTTAAAAGG CACCTCGACT TGCAACACTT CGAGGGGGGC CCCAGCCCCG 360
CAGCCACTGG GAACCGCGCG TCCGCTTCCC CCCAGCGCGC TCCCCACCCG GCCCGGCCAC 420
GAGTGGACTC CAGGCTGGCC GCCATGTTGC CGGAGTCGCC GCCGCACCCC GAGCGCGGCC 480
CGCCCGCCCG ACCGTGGCCC GAACCCGGGC CCCGCCCGCA CGGCGAGGAG GCAGTGCGGC 540
TCGGCTGGGC AGGGGAGGGC GGGAAGCCCA CAGGGCCCGC 580
|
