| Tag | Content |
|---|
EnhancerAtlas ID | HS120-05433 |
Organism | Homo sapiens |
Tissue/cell | LNCaP-abl |
Coordinate | chr6:33538410-33539440 |
Target genes | | Number: 27 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Gata1 | MA0035.3 | chr6:33539397-33539408 | TCCTTATCTGT | + | 6.14 | | Myod1 | MA0499.1 | chr6:33538697-33538710 | GGTGACAGCTGCA | - | 6.5 | | YY1 | MA0095.2 | chr6:33539199-33539211 | GCGGCCATCTTG | - | 6.62 |
|
| | Number of super-enhancer constituents: 15 | ID | Coordinate | Tissue/cell |
| SE_10724 | chr6:33537553-33540480 | CD19_Primary | | SE_12367 | chr6:33537599-33540406 | CD3 | | SE_15122 | chr6:33537647-33541226 | CD4_Memory_Primary_7pool | | SE_15643 | chr6:33537713-33540264 | CD4_Memory_Primary_8pool | | SE_16059 | chr6:33537640-33540103 | CD4_Naive_Primary_7pool | | SE_16811 | chr6:33537720-33540262 | CD4_Naive_Primary_8pool | | SE_17741 | chr6:33536568-33541584 | CD4p_CD25-_CD45RAp_Naive | | SE_18195 | chr6:33536568-33541740 | CD4p_CD25-_CD45ROp_Memory | | SE_19684 | chr6:33537966-33540911 | CD4p_CD25-_Il17p_PMAstim_Th17 | | SE_21876 | chr6:33537838-33540167 | CD8_Naive_7pool | | SE_22263 | chr6:33537639-33540503 | CD8_Naive_8pool | | SE_23054 | chr6:33537548-33541008 | CD8_primiary | | SE_23452 | chr6:33538536-33539961 | Colon_Crypt_1 | | SE_24002 | chr6:33538588-33539841 | Colon_Crypt_2 | | SE_50523 | chr6:33538390-33540761 | Sigmoid_Colon |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH06I033569 | chr6 | 33537687 | 33540496 |
|
Enhancer Sequence | TGGATATGGT GGTTTAAGTT TAATGAATAC ATGTAAATTT ATTTTAATGC ATTCAGGTGA 60
CTATGTCATA ATAACTTGTT CAATATACTG AGTGATTTTA GGCTAAGGAA GGATTTTTTC 120
AAATGAAAGG GTTTGGATGG ACACTCGGTG ACTCTCTAAA ATATACTCTT CAGAGGAGGT 180
AAAAATAAAT ACGTGAAGGT AAAACGGCAG GGTGGGGGTG GGGAGAATGT GAGGCTGTTG 240
TGTGCAAGGA AGGGCGGGTA TTCATACTGA AACTGCAGAA CTAAGCAGGT GACAGCTGCA 300
CACCGCTCCT TTCCCTGGCC GGGCTGCCCC AGCTCAGTGA CATCACAGAC TGTGACGAAC 360
CCAGACGTAT TTGGTGGAAA CCAAGCCACA ATCTCAGAAG CAGCGCACAG TTTGAGTAGA 420
AATGAGTTTT TTTGGTTTCT CTTCCCTAAT ACCCACAGAG CCCCTACACT CCCGTTATCC 480
TCGCAGCCCC TGGCTGACTG TGTCCGACCT AACTTCTCGC CCCCTGGTTT CAGAATATCC 540
TGGCAGCGGA ATAGAGGGCG TTGGGGGGCG GTGCAGGCCA AAACTTTTTG GGCTGCCCCA 600
CCCATGCCTT TCCGGTTAGC GTTGCAGCTC CTTAGACGAG TAGGCTAACC ACAGCCCACC 660
CGCCTTTCTT CCAGCGATGC AACGATCTGT TCGCCGCTCA ATGCCGCATG CTGTTCAAAG 720
CCCAGAGGCT GGAGTGGGTG CGCCCCAAAG GCCCCGCCCA AGGAAGGGCA CGCTTGCGTG 780
CTCGCGGCGG CGGCCATCTT GGACTCGGGC AGCCGCCCAC TTCTAACCTC TATGGCATCG 840
CTCCGGGAGG GAGGCGACCC CGCACTCTGG GCCTCTTAAA CCTGTGCTCG CGAGCCCCAC 900
ATTGCTCTCC GGCCTCCACG TAAAACTCGA GCCAGTTTCC TGGTGGCAAG TCCTCACTCC 960
TTGGGTGACT CTGAGAAAGC ACCCGTTTCC TTATCTGTAA ATAGTAGTTT GAGTACCCCC 1020
ACCCCCGTCT 1030
|
