EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS120-05328

Organism

Homo sapiens

Tissue/cell

LNCaP-abl

Coordinate

chr5:179251320-179252140

Target genes

Number: 19
Name	Ensembl ID

RUFY1	ENSG00000176783
RP11	ENSG00000249140
HNRNPH1	ENSG00000169045
C5orf60	ENSG00000204661
AC136604.1	ENSG00000228259
CANX	ENSG00000127022
HMGB3P22	ENSG00000225051
CBY3	ENSG00000204659
MAML1	ENSG00000161021
LTC4S	ENSG00000213316
SQSTM1	ENSG00000161011
MGAT4B	ENSG00000161013
7SK	ENSG00000222448
Y	ENSG00000252202
CTC	ENSG00000245317
C5orf45	ENSG00000161010
TBC1D9B	ENSG00000197226
RPS15AP18	ENSG00000242979
RNF130	ENSG00000113269

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Mecom	MA0029.1	chr5:179252117-179252131	CTTTATCTTATCTT	-	6.79
NR2C2	MA0504.1	chr5:179252033-179252048	CCGGGTTAAAGGTCA	+	6.02
Nr2f6	MA0677.1	chr5:179252034-179252048	CGGGTTAAAGGTCA	+	6.51
Rxra	MA0512.2	chr5:179252034-179252048	CGGGTTAAAGGTCA	+	6.81
ZNF263	MA0528.1	chr5:179251988-179252009	GGAGGAAGGAGAGGGGGATGC	+	6.2

dbSUPER

Number of super-enhancer constituents: 4
ID	Coordinate	Tissue/cell

SE_00453	chr5:179243699-179253308	Adipose_Nuclei
SE_42695	chr5:179249241-179251445	Lung
SE_48381	chr5:179244927-179251667	Psoas_Muscle
SE_65445	chr5:179242577-179253311	Pancreatic_islets

HEDD

Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 1
Chromosome	Start	End

chr5

179251410

179251587

Enhancer Sequence

CAGGTGAGGC TTGTGTTGGA ACCTGCTTCT GATTGGTGAC AGTAGTCAGG CAGCCTGTGT 60
GCAGGGCCCT TGTGCAAAGC GTGTGTGCAA GGCAAGAATT CAGGATACCC CCCACCTTCC 120
TGGTGCCCTA CAATCACACA AGAACCCTGC AAAGTGGGGT GTATTCTCTC CATTTCCCAA 180
ATGGGGAAAC TGAGGTGCCT AAGTGCCTGA GGCCACAAAT TTACCTGCAC AGCCCTTCCT 240
ACCTCAGGAG GCTGCCCTCT CAAGGTACCC TGAGGTGCAG GCAGGGAGGC CCTTCCAGCC 300
CAGGGGTCTT TGATGCACTT TGTTCTCTTT TGTGATGGTT GTCAGGAAGA TCAGAGCCAA 360
AGTTGCTGAA GTCCTTTGAA ACATAGTTAT AAGTGAAAGA CTTACCGTTA GCTTTGTAGT 420
CTAGATTTTT GGATTCTGAT TTTATTAATG TTACTGTGTC CTGTGAATCA CCTCACCCTT 480
TGGGACAAAG ATGGGGATGT TTGCTTGACT TTGAGTAAAT AACATATTTA CTCAAGGAGG 540
TGATCAATAT TCACAGTGTA CTGAGCCTGA GCCTCTGTGG GGTTGCTGAG CACCAGGGTC 600
ACAGATGAGG GGGAGATGGC ACGGGAGAGT GGAGATGCTC TCTGTGCAGG GCCAGGGGGT 660
GCAGAGTGGG AGGAAGGAGA GGGGGATGCT GAGTGGGTCA CTGGACAAGA TGTCCGGGTT 720
AAAGGTCACC CGGGAACACA GGGACCTTGG CAAGAAGGTG ACAGGACTGT GACAGGTATC 780
CAAGGCATTA AAGATATCTT TATCTTATCT TTGTAAAAAT 820