Tag | Content |
---|
EnhancerAtlas ID | HS120-05052 |
Organism | Homo sapiens |
Tissue/cell | LNCaP-abl |
Coordinate | chr5:1111390-1111980 |
Target genes | |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
RFX1 | MA0509.2 | chr5:1111706-1111722 | CGTTTCCATGGCTACC | - | 6.72 | RFX1 | MA0509.2 | chr5:1111706-1111722 | CGTTTCCATGGCTACC | + | 6.74 | RFX2 | MA0600.2 | chr5:1111706-1111722 | CGTTTCCATGGCTACC | + | 6.78 | RFX2 | MA0600.2 | chr5:1111706-1111722 | CGTTTCCATGGCTACC | - | 6.95 | RFX5 | MA0510.2 | chr5:1111706-1111722 | CGTTTCCATGGCTACC | + | 6.12 |
|
| Number of super-enhancer constituents: 19 | ID | Coordinate | Tissue/cell |
SE_23448 | chr5:1109533-1112603 | Colon_Crypt_1 | SE_23989 | chr5:1109855-1112582 | Colon_Crypt_2 | SE_24840 | chr5:1109530-1113037 | Colon_Crypt_3 | SE_28283 | chr5:1103691-1112207 | Fetal_Intestine | SE_29290 | chr5:1109806-1112179 | Fetal_Intestine_Large | SE_31577 | chr5:1105288-1113807 | Gastric | SE_40750 | chr5:1098688-1112458 | Left_Ventricle | SE_41639 | chr5:1109633-1113854 | LNCaP | SE_42534 | chr5:1098973-1112501 | Lung | SE_47233 | chr5:1089215-1112103 | Panc1 | SE_47514 | chr5:1110647-1112462 | Pancreas | SE_48976 | chr5:1101390-1112419 | Right_Atrium | SE_49487 | chr5:1106593-1112438 | Right_Ventricle | SE_50482 | chr5:1101838-1112417 | Sigmoid_Colon | SE_52622 | chr5:1105269-1112422 | Small_Intestine | SE_53895 | chr5:1098905-1112484 | Spleen | SE_57916 | chr5:1110658-1112588 | VACO_9m | SE_61441 | chr5:1092795-1176993 | Toledo | SE_65274 | chr5:1105353-1111978 | Pancreatic_islets |
|
Enhancer Sequence | GATTCCCGGA ACGGGGGACG GGAACACGGA GGACGCGGCC TGAGCAAGGC CCCGGTGGCT 60 GCCCCCTCCC CAGCCAGGGC GCAGTCCTTC CTGTTCCGCC TCTGGGGGGT GGGCGGCTCC 120 TCCAGGGTCA GGCGGGGGCA GGACGGGCCG GCCCGGGCTA GTGTTACCGG ACGGCCGCGG 180 CGCAGGGGAA GGGAGAGCGC GGGGGACGCA GGACGCCCCG GCTCCCGAAC CGCCCGGGTC 240 TCCACCGCCA CCCCTGTCCC ACTAGGGACC ACCCAGGGGC CCGGGCTCCC TCCGGAGGCG 300 CGCTCCAGCC CCTCCCCGTT TCCATGGCTA CCAGCAGCGG CGTCCACACC TCTGCCCCCG 360 GTCCCACCCG AGCTGACCGT ACCGGGAGCC CTGGCAGGGC CCCTCGCCCC CTAGCGCTGC 420 CACTAACGTG GGGTGGGGGC CCTCGTGGGG GACCGAGAAC AGGCGGTGGG GGCGCGGGAA 480 GGGGCGCCTC CTGTACCCCC GGCCCCGCCG CCCGCCTCCG CTCCCGGATG CCGGGCCCAG 540 ACCCGCGCTC GGGGCGCTCG GCCTTTGTCC GGCCAGGTGC GGCCGCGCTC 590
|