Tag | Content |
---|
EnhancerAtlas ID | HS120-05012 |
Organism | Homo sapiens |
Tissue/cell | LNCaP-abl |
Coordinate | chr4:154170100-154171240 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
EWSR1-FLI1 | MA0149.1 | chr4:154170407-154170425 | CCCGCCTTCTTTTCTTCC | - | 6.2 | KLF5 | MA0599.1 | chr4:154170452-154170462 | GGGGCGGGGC | - | 6.02 | NKX2-3 | MA0672.1 | chr4:154170269-154170279 | ACCACTTGAA | + | 6.02 | Zfx | MA0146.2 | chr4:154170451-154170465 | CGGGGCGGGGCCTG | + | 6.18 |
|
| Number of super-enhancer constituents: 12 | ID | Coordinate | Tissue/cell |
SE_05032 | chr4:154169087-154173006 | Brain_Cingulate_Gyrus | SE_06329 | chr4:154167418-154172994 | Brain_Hippocampus_Middle | SE_07138 | chr4:154169129-154172779 | Brain_Hippocampus_Middle_150 | SE_08153 | chr4:154169222-154172642 | Brain_Inferior_Temporal_Lobe | SE_23366 | chr4:154169379-154171269 | Colon_Crypt_1 | SE_24107 | chr4:154169513-154171199 | Colon_Crypt_2 | SE_27756 | chr4:154169181-154171526 | Fetal_Intestine | SE_28651 | chr4:154169311-154171754 | Fetal_Intestine_Large | SE_31903 | chr4:154169156-154171640 | Gastric | SE_32878 | chr4:154169779-154171279 | H1 | SE_50679 | chr4:154169361-154171245 | Sigmoid_Colon | SE_57088 | chr4:154169769-154170436 | VACO_400 |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH04I153247 | chr4 | 154169068 | 154172081 |
|
Enhancer Sequence | TAGAACCCTC CAGGGTTAGC AGGCAAAGAG CTGTGGACCC CGGACACGGG AAAAGGCCAC 60 AGTCGGGAGA ACTCCTGTTG CTGGAGGGCC AGGCGGGGGC GATCCCCAGG GCTCCCAGCT 120 TTTAATGCTG TCACCGCGGG CCTTACTCCC TCCTCTTCCC CACATCGCCA CCACTTGAAT 180 CAGTTCTTTT ACAAAGTGGT TCTATTTCCT GGTGAGACAA AAAGGTTAGA AAAGGAAACC 240 TAGAGGGGGT GGGGGAAAGA CAGAGGTTCG GAATACCGGC GCGCAATCGC CATCTGGGTG 300 GAGGGGACCC GCCTTCTTTT CTTCCGCCTG AGCGCAGCTC GGCTCCCGCC TCGGGGCGGG 360 GCCTGTTGCT ATGGAGCCCG GGCCCCGGCA GAGCCTGCGG GGTGAAAGCC CCTAGGGCTC 420 CGCCTGGCAT GCGTGGCCGG GGCTGTCTGA GATTTCCCCA GGTCGGTGGT TATGACCGCA 480 GGATGGAATC GTAGAGGTCG GGTGATTTGG TCAGTAGAGA GGAACATTTG CGAGGTTCTC 540 TCTGAATTAC ATGTTGGTCT AAAAGTAATC CACTATCTGG GACCGAGAGG AAAGCATGTG 600 TGGAAGAGGC AGGCATTATT AGCAGCGCGT CCGCCTCGGC CACCTCCCTG CTCCCGCCTC 660 GGCCACCTCC CTGCTCCCGC CCCGGCCCTG GGGGCCTCTG TTCAGCCTCC ACCAGCTCAG 720 TCGCCCACGG AGACTCCCGA ACTCTTAAAT CCCAGCCCTG TAGTCAAAAC CACTGCATTA 780 ATTAAACAAG GTAAACTGGT GAGGCAAGCA GGAACTTGAC ACCGCCTTGA ATTTAATTGT 840 TAAAATGAGA AGTGTGGTAA TGGAGCTCTG CTTAAGAGAA AAACAATACT TGATACCGAT 900 GTGCACATCG ATGTGGACAC GGATGCAATC AGGAACCCAT AGTTAGCACC GGGAGATTAC 960 ATTCCGGGTA TACTCAAGAT AGATAGAGTC AACTTTGAAT TCTCGAGGCC AAGCAATGGG 1020 CGAAACAAAA GAGCTTTGTG TTTGCGTGCT TTTGCTTTTT GTTACAGTCA GAGCAGGACA 1080 AAGAATAATG AAGGAGTAGA CATGTTATTA CTTGGGCATT TAATAATCAG TGCATGGCAG 1140
|