EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS120-04706 
Organism
Homo sapiens 
Tissue/cell
LNCaP-abl 
Coordinate
chr3:141120660-141122170 
Target genes
Number: 2             
NameEnsembl ID
SNPs
Number: 1             
IDChromosomePositionGenome Version
rs2871960chr3141121814hg19
TF binding sites/motifs
Number: 4             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
KLF16MA0741.1chr3:141121323-141121334GGGGGCGGGGC-6.02
KLF5MA0599.1chr3:141121324-141121334GGGGCGGGGC-6.02
KLF5MA0599.1chr3:141121329-141121339GGGGCGGGGC-6.02
KLF5MA0599.1chr3:141121528-141121538GGGGCGGGGC-6.02
Number of super-enhancer constituents: 45             
IDCoordinateTissue/cell
SE_00345chr3:141117560-141134173Adipose_Nuclei
SE_01068chr3:141120510-141122061Adrenal_Gland
SE_01738chr3:141120511-141122239Aorta
SE_02321chr3:141120367-141127210Astrocytes
SE_03038chr3:141120427-141122072Bladder
SE_03218chr3:141120477-141121358Brain_Angular_Gyrus
SE_03218chr3:141121531-141122233Brain_Angular_Gyrus
SE_04033chr3:141120331-141124046Brain_Anterior_Caudate
SE_05020chr3:141118731-141124018Brain_Cingulate_Gyrus
SE_06003chr3:141118855-141125601Brain_Hippocampus_Middle
SE_06927chr3:141118223-141123733Brain_Hippocampus_Middle_150
SE_07904chr3:141118616-141124269Brain_Inferior_Temporal_Lobe
SE_12333chr3:141120254-141122511CD3
SE_15060chr3:141119019-141123664CD4_Memory_Primary_7pool
SE_15655chr3:141118803-141123360CD4_Memory_Primary_8pool
SE_16753chr3:141120335-141123540CD4_Naive_Primary_8pool
SE_21172chr3:141119982-141123669CD8_Memory_7pool
SE_22787chr3:141118983-141123772CD8_primiary
SE_25813chr3:141117660-141135856Duodenum_Smooth_Muscle
SE_27307chr3:141120342-141123398Esophagus
SE_32050chr3:141120359-141122113Gastric
SE_32498chr3:141117623-141123429GM12878
SE_38250chr3:141120169-141126657HUVEC
SE_38859chr3:141118933-141128067IMR90
SE_40762chr3:141120295-141126051Left_Ventricle
SE_42261chr3:141120230-141124145Lung
SE_43497chr3:141114325-141134259MM1S
SE_44200chr3:141117921-141128014NHDF-Ad
SE_44836chr3:141120403-141127968NHLF
SE_45548chr3:141117565-141136063Osteoblasts
SE_46955chr3:141120491-141122211Ovary
SE_47935chr3:141120533-141121842Pancreas
SE_48372chr3:141120294-141123417Psoas_Muscle
SE_48892chr3:141120349-141122333Right_Atrium
SE_49612chr3:141120672-141122126Right_Ventricle
SE_50741chr3:141120299-141122320Sigmoid_Colon
SE_51382chr3:141118581-141123614Skeletal_Muscle
SE_52489chr3:141120337-141123922Small_Intestine
SE_54659chr3:141117580-141134234Stomach_Smooth_Muscle
SE_55659chr3:141118094-141122127u87
SE_61127chr3:141079164-141144945HBL1
SE_62287chr3:141079553-141134828Tonsil
SE_64416chr3:141120178-141127054NHEK
SE_67139chr3:141114325-141134259MM1S
SE_67471chr3:141118094-141122127u87
Enhancer Sequence
AAGAAGAGGA CTGGGTCTTT TGCGTGAAAT AGTTTCTGTG CCACGTTGGG AAAAATCTAT 60
CTAGGCCTCT CTTGACGGCC ATGGAAAAAA CACAGGTGAC TCCTTATTCC TGAGAATTTG 120
ATGCAATTGA AACAGCGACT TTCTGCGAAT CCAGTGTGCA TAGTCTCGAA CAGGAGCCCA 180
CGGACCCTTC TGCGGCCCGA GGCCTTGTTC TGACAGTCAC CAGGCTCTGT GGCCCAGAGT 240
CCTAACTGCG TTGTCCTTCG GCAGGTTCTG AATTGTGTCC TCCCTGAGGA GGCTGAGGCC 300
GCTGCCTCCT TGGTGGGGGG CCCCGGCTGG CCACTGGGTC GGGCATGGGG CCTTACGGGG 360
CCCTCACGGG TCCCGCCGCC GCCCTCCTGA GGCCTGGTCC TTGGCGCCGC AGTTACCCCA 420
GCCCCGGGCC CGCGGGGCTG CGGGTCGGGC CGACCTCCTC CCGGACGGGC TGCGTCCTCT 480
GCCCCGCGCC GGGGGCGGGC CGGGCCGGCA GAGCCGAGCC GCCGGCGTCC ATTTTCTGGG 540
CGGTGCTGTG CAGCGCTGCG GCCGGACTCA CGGGTCCGGA AGCACCATGG ACCCCCGGGG 600
AAACGCGCCG GCGGCGAAGG AGCCGAGCCC CGTAAGTGCC CCTCGCAGGG TCTTCGCGGG 660
GCCGGGGGCG GGGCGGGGCG AGGCGCGGCC TGCGGGCGCG GCGCCCGTGG CGCCGCCAGC 720
CCGATCGCTC CTCGCTTCTG GAGGGAGCCG GGAAGCCGGG CTGGGGAAAC CCTCGCAAGG 780
GTTGAGCTCT GCAAACGCAG CAGAACCGAG CTGCCCGCGG GGAGGAAGCG CCCGCAGGTG 840
CCCGGACTCC GGGGCCCGCG CCCGGAGCGG GGCGGGGCGG GGTGGGTTCG GCTGGAGAGT 900
GCGGGCAGGT TGCGCCGCAT CCCGTGGCCC AACTGCGCGG CTGTGCTAGA GGGCGGGGGC 960
CGAGGAGGAA TGCGCTCCCG GGGCTGGGGA CGTGGTGGGC TCGAGTCCAG CGGGCTCGGG 1020
CACTGCTTTG ACAGTCACAC CTCCCGTCTC CTGGATTGGG AATCGGACCC TAGTCCTGAC 1080
CCTATGGGAA CTTGATGATT TCCTTGATGC AACACCAAGC CCCTGGAATT GAAAGGGACG 1140
TGCAAAGGCA GGGACCTGCC CCCAGGGGTT TGCAGTCTCA GCCGCCTACT TCTGCAGTAG 1200
TAAGGTCTGC TCTGTTGGTA CAACATACAA CACAACCGCC CGCCGTTAGC CACTTTTTTT 1260
ATAGGGTACA TCATAAATCA CCTGAGATTT TAGTCTGTCC GCGGTTCCAC TTTATAACTC 1320
CTGCACTGCG GTAGGTAAGT GCCTAATTCC ATTCTGGACG TTGGCCCTAA TTGAGTATCC 1380
CTTCTAAGGA TCGATTATAG GTGATATGTG TTATGGTGCC TTATACATAT TTTAAAGGTT 1440
AAAGACTTTT CTTCTGTGAA GCTCAACTAC TTGGTCAGAT TCTCATGGTT ACAAAATGTG 1500
GAAGAGTTTT 1510