| Tag | Content |
|---|
EnhancerAtlas ID | HS120-04633 |
Organism | Homo sapiens |
Tissue/cell | LNCaP-abl |
Coordinate | chr3:105586500-105587570 |
Target genes | |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| EWSR1-FLI1 | MA0149.1 | chr3:105586792-105586810 | CCCTCCTGCCTTAATTCC | - | 6.16 | | NR3C2 | MA0727.1 | chr3:105587260-105587277 | GGGGACAAAGTGTCCCT | + | 6.21 | | PRDM1 | MA0508.2 | chr3:105586873-105586883 | TCACTTTCAC | + | 6.02 |
|
| | Number of super-enhancer constituents: 8 | ID | Coordinate | Tissue/cell |
| SE_30424 | chr3:105585381-105589720 | Fetal_Muscle | | SE_45724 | chr3:105578887-105589993 | Osteoblasts | | SE_58429 | chr3:105516039-105603000 | Ly1 | | SE_60116 | chr3:105579122-105602970 | Ly4 | | SE_60503 | chr3:105515928-105602305 | DHL6 | | SE_61288 | chr3:105546001-105602884 | HBL1 | | SE_62124 | chr3:105571715-105602266 | Toledo | | SE_62581 | chr3:105541200-105602367 | Tonsil |
|
Enhancer Sequence | CTAGAGACTA ACTTGTACCA CTGCATCTTC CTCCATCGAT TAGAGCAAAA CCAAAAGTTC 60
CGGATTCATC TTTATCAATA AGCTTGTGAA TTTACACTCT CAATCTTTAC ACACAGTAGT 120
TTTAAGAGCA GTGATCCTAG ATTTGCTTTT ACAATACTAA GAGTTAAAGA TGCATCCTGC 180
TCACGTTTCA AGTAGCTAAG GCTGAACTAA TACTCAACTC ATAAAAAAAA AAAAAAGAAC 240
AAACAAAACT TAAACAGGTT TCCCCCACCT AGATAAAAAC AGAATGTTCT TCCCCTCCTG 300
CCTTAATTCC AATTCAAAAT ACCAGAACAA CTGAAGGTCC TATCATACAT TTTGGGAGCC 360
TTACGCAGAA ACTTCACTTT CACTCTGTTA GATTTCTCCA AGTTACATAA ACATAAAGAT 420
TATCCTACAC AAACGTAAGG GACAGCTCTG TTGTCAACAA AAGCGCAGGG CATGTCCCAC 480
ACTAAAACCA CCAAGTACGG ACACACGAAC ACCTTTCTTT AAATCAACGC GGTGAGTCGT 540
TATTCCCAAG AACCAAATGA AATTAACACA CAAATAGCCC ATTTGAAAAG AGAAAAGAGA 600
AAAATGACAA GAGCGGCCAC GGAAAGGAGG AGTTCACTTC TCTGGCTCCT CGCCTCTGCC 660
CTCAACCCAA AGCTTTGTTT CAGGACGCCT GTGTCCCTTC CCTGCTCAGG CCCCTTCCCG 720
GCCCCTCGGG TCTGAGCTGC AGGAGGAAGG TGGACTGGGA GGGGACAAAG TGTCCCTCCC 780
GTGCCCGCAG CACCGTCCGT CTAGGGCGCG GGAGGGACAC TGTGGGCTCG GCGCCTGGGT 840
GGACGCGCCT CCCGGCCGCC TGCTGCAGTC CTCACCGCCG TCTGCCTGGA CGCCCTCTCC 900
CTCCTCCCCG GCCTGCGGGT TCTGGTCTTT AAATGCCCCA CTTCAAACTG GACGGCGGCG 960
GCAAAGGCAG CTGAGAGCCA GGGCTGTCCC CTCTTCCTCC TTGGCCCGCG CCTGGCTACC 1020
CCGGGCCCCC GGGCCGGCAA GAAGTGTGGA GCCTCCCCGG CGACCCCTTC 1070
|
