EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS120-04542

Organism

Homo sapiens

Tissue/cell

LNCaP-abl

Coordinate

chr3:48593940-48594110

Target genes

Number: 22
Name	Ensembl ID

SNRPFP4	ENSG00000235627
NDUFB1P1	ENSG00000231884
CDC25A	ENSG00000164045
ZNF589	ENSG00000164048
MRPS18AP1	ENSG00000229759
CTD	ENSG00000228638
SPINK8	ENSG00000229453
FBXW12	ENSG00000164049
PLXNB1	ENSG00000164050
CCDC72	ENSG00000232112
CCDC51	ENSG00000164051
RP11	ENSG00000244380
TREX1	ENSG00000213689
SHISA5	ENSG00000164054
PFKFB4	ENSG00000114268
UCN2	ENSG00000145040
COL7A1	ENSG00000114270
UQCRC1	ENSG00000010256
TMEM89	ENSG00000183396
SLC26A6	ENSG00000225697
NCKIPSD	ENSG00000213672
IP6K2	ENSG00000068745

dbSUPER

Number of super-enhancer constituents: 4
ID	Coordinate	Tissue/cell

SE_09756	chr3:48593050-48599570	CD14
SE_56365	chr3:48592516-48605066	u87
SE_67746	chr3:48592516-48605066	u87
SE_69000	chr3:48589148-48599981	H9

Enhancer Sequence

ACTGTCACGA CCGCCTCACC TGTCCCCAGC AGCCTCCCCA GTCACGGCAA CCTCACCTGT 60
CCCCGGTTCC CCATCTGTCT CCCGCCCCTT CTCCATGCGA GACCCCCGCC CAGGCCGCCC 120
TACCCACCCA TCCCGGTGCA CCTCCCACCT CCTCCCAGAG GACCCCGCCT 170