EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS120-04459 
Organism
Homo sapiens 
Tissue/cell
LNCaP-abl 
Coordinate
chr3:10233440-10234480 
TF binding sites/motifs
Number: 3             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
JUN(var.2)MA0489.1chr3:10233584-10233598AAAGAATGAGTCAT+6.6
RELAMA0107.1chr3:10233977-10233987GGGAATTTCC+6.02
RREB1MA0073.1chr3:10233730-10233750TGTGTGTGTGTGTGTTGTGT-6.19
Number of super-enhancer constituents: 25             
IDCoordinateTissue/cell
SE_01374chr3:10233588-10237950Adrenal_Gland
SE_02168chr3:10232890-10237812Aorta
SE_03544chr3:10232926-10234465Brain_Angular_Gyrus
SE_05284chr3:10230421-10238972Brain_Cingulate_Gyrus
SE_06271chr3:10230310-10239221Brain_Hippocampus_Middle
SE_07281chr3:10230345-10238980Brain_Hippocampus_Middle_150
SE_08553chr3:10230394-10238941Brain_Inferior_Temporal_Lobe
SE_10483chr3:10232905-10238935CD19_Primary
SE_11117chr3:10230364-10244148CD20
SE_12182chr3:10233126-10238474CD3
SE_18222chr3:10230393-10242416CD4p_CD25-_CD45ROp_Memory
SE_18887chr3:10230456-10239154CD4p_CD25-_Il17-_PMAstim_Th
SE_19527chr3:10232850-10237954CD4p_CD25-_Il17p_PMAstim_Th17
SE_20302chr3:10232846-10239394CD56
SE_22972chr3:10232902-10238955CD8_primiary
SE_27300chr3:10232887-10237905Esophagus
SE_35045chr3:10230429-10236765HeLa
SE_36305chr3:10230416-10237861HMEC
SE_38379chr3:10230299-10236156HUVEC
SE_46480chr3:10232852-10239588Osteoblasts
SE_55870chr3:10232869-10239613u87
SE_58615chr3:10208482-10269048Ly1
SE_62498chr3:10211834-10316085Tonsil
SE_64685chr3:10232624-10237158NHEK
SE_67695chr3:10232869-10239613u87
Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 1             
ChromosomeStartEnd
chr31023369510234220
Number: 1             
IDChromosomeStartEnd
GH03I010188chr31023045810242599
Enhancer Sequence
TCCCTCGAGT TTGTTTTCAG CATAGAGCAC CTCCCAGTTT ATAATTAGAT GTCTTTTATT 60
TAACTAGCTT AATGTCAGTA TTACGGCAGT TTTGATAAAG GATTCCCCAT TCCCTAACAC 120
AAAATGAATG AATGAATGAA TGAGAAAGAA TGAGTCATTT CAGCAGCAGG TGGAGTACAA 180
GTTCAGTGGA GAACCAGGGA TCGCACAATT AGGAAGGCAG GCTGTGCTCT CAGGTTTGCC 240
TCATTTCAGG TCTAGCTTGA GTTGGGAGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG 300
TGTGTTGTGT GTTGTGTGTG ACTGTGTATG GCCTGGAGGG CCAAACCCAG GGATTAGGAG 360
GGAAAGGAAA AGAGAGGGCG CGGAAAGCTG TGTTTGTCCC TGATAGAGCC AGCTGGCACG 420
AGGGTGCTTT AGTTATAGCT GAATCACTTT TGTTTGTTCT GGAAGGGATC TATTCTGGCC 480
ACATGAGTCA GCCTAAGAAC AAATTACTGT GTAGTTTGAC GGGCGTGAAG GGTTGGGGGG 540
AATTTCCAGA GTGTGCTCAC CCAGGAAAGA CCTTGTTGCC AGCTCTGAGT CCCCTCTGCT 600
CCAACAGCTC CTGGATTTGC CACCGTGTGA AATGTTCTCA GGCAGCTAGT GTGACGGCCC 660
AGGCCCCGTC AGCCAAAGGC CCAGCACCCA TAAACATCCT TTAGTCCTTT CTCCTGAAGG 720
AACTGGGCCA TAAACAAGCA CATAATAAAT AAATCTGCAT TCTAGGCTTC GCTTTCTTCA 780
GATATAAGAC AACTACCTTA TACTTGGTAG CAATTATCCC CCAGAGCTGT TACCTGAATT 840
AAATAGGCCA CAGATATGGG CAAGAACTTA GGAAAAAAAG CCTGACCTAG AGTTAGAGTG 900
GTCATTATAA TAACAGTAGT AGGAGGCCAA GGCGGACGGA TCACCTGAGG TCAGGAGTTC 960
GAGACCAGCC TGGCCAATAT GGCAAAACCC CGTCTCTACT AAAAATACAA AAATTAGCCG 1020
GGCGTGATGG TGTCTGCCTG 1040