| Tag | Content |
|---|
EnhancerAtlas ID | HS120-04194 |
Organism | Homo sapiens |
Tissue/cell | LNCaP-abl |
Coordinate | chr20:62257780-62258300 |
Target genes | | Number: 20 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| GLIS2 | MA0736.1 | chr20:62258270-62258284 | CGCCGCGGGGGGGC | - | 6.15 | | ZIC1 | MA0696.1 | chr20:62258270-62258284 | CGCCGCGGGGGGGC | - | 6.13 | | ZIC3 | MA0697.1 | chr20:62258269-62258284 | TCGCCGCGGGGGGGC | - | 6.65 | | ZIC4 | MA0751.1 | chr20:62258269-62258284 | TCGCCGCGGGGGGGC | - | 6.47 |
|
| | Number of super-enhancer constituents: 6 | ID | Coordinate | Tissue/cell |
| SE_16797 | chr20:62257352-62260395 | CD4_Naive_Primary_8pool | | SE_22102 | chr20:62257183-62260789 | CD8_Naive_8pool | | SE_34418 | chr20:62257074-62260720 | HCT-116 | | SE_43229 | chr20:62257113-62260548 | Lung | | SE_53598 | chr20:62257118-62260467 | Spleen | | SE_57660 | chr20:62257319-62259814 | VACO_503 |
|
Enhancer Sequence | CGGGGTGGCC CCTGGGGATC GCGTCCCTGC GGGTCGGGTG CCTGCGGGGT GGTCCTTGTG 60
GGTCGCGTCC CTGTGGGGTG GTCCCTGTGG GTCGCGTCCC TGTGGGGTGG CCCCTGCGGG 120
TCGCGTGGTG GCCCCTGCGG GTCGGGTGCC TGCGGGGTGG TCCCTGTGGG TCGCGTCCCT 180
GCGGGTCGGG TGCCTGCGGG GTGGTCCCTG CGGGTCGCAC CCCTGCGGCG TGGTCCCCCC 240
GGGATGGGTC CACCGAGGAG GCCGCTGGAG GCCGAGCCCG CGCCCGCCCG CGGCGCCAAG 300
ATGGAGGCAG GAAGCGCCGC CGCCCGCGCC CGCCACCGCC CGCGCCGCCC GCCTGACGCC 360
GCCGTTGCGC CTGACGCCGC CGCCCGCGCG GCCGCCCCTC CCCCGGCCCT CCCCTCCCCC 420
CGCCGTAACG TCCTGACGCT CCGCAGGGAC CCCTGACTGG ACGGCGGCGC GTGAGCGGAG 480
CGAGAGGCCT CGCCGCGGGG GGGCCGCGGG CTCGCCGGCG 520
|
