Tag | Content |
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EnhancerAtlas ID | HS120-04176 |
Organism | Homo sapiens |
Tissue/cell | LNCaP-abl |
Coordinate | chr20:57227200-57227820 |
Target genes | |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
GATA2 | MA0036.3 | chr20:57227287-57227298 | GAAGATAAGAA | - | 6.02 | Mecom | MA0029.1 | chr20:57227283-57227297 | AAGAGAAGATAAGA | + | 6.13 |
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| Number of super-enhancer constituents: 17 | ID | Coordinate | Tissue/cell |
SE_02728 | chr20:57224680-57228662 | Astrocytes | SE_12365 | chr20:57225568-57228874 | CD3 | SE_15176 | chr20:57224062-57229812 | CD4_Memory_Primary_7pool | SE_15640 | chr20:57224238-57229200 | CD4_Memory_Primary_8pool | SE_16146 | chr20:57225329-57228862 | CD4_Naive_Primary_7pool | SE_17098 | chr20:57224440-57229149 | CD4p_CD225int_CD127p_Tmem | SE_17511 | chr20:57223949-57240730 | CD4p_CD25-_CD45RAp_Naive | SE_18143 | chr20:57223823-57230102 | CD4p_CD25-_CD45ROp_Memory | SE_18773 | chr20:57224158-57240779 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19510 | chr20:57224209-57229211 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_21444 | chr20:57224423-57229240 | CD8_Memory_7pool | SE_21758 | chr20:57224291-57228759 | CD8_Naive_7pool | SE_22200 | chr20:57224123-57229383 | CD8_Naive_8pool | SE_29713 | chr20:57225430-57237746 | Fetal_Muscle | SE_32785 | chr20:57227517-57228410 | H1 | SE_54456 | chr20:57224168-57228567 | Spleen | SE_55971 | chr20:57224877-57231789 | u87 |
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Enhancer Sequence | CTCCTGGCGG CCTCTCCGAC ACACGGACCG TGTGCACTGC GGCTCTGCCT GTTTGTCTGT 60 CTCTGTCTGT CTCTCTGTTT AAAAAGAGAA GATAAGAATA ATAAGACTAA GAATAATAAG 120 ATCTCTTGGC TAGAGTCAGG GGGCATCTGT AGCCCTGGAT GAGGAAGAAG CGGTGCTGTG 180 AGGCCGCAGC TCCACCTCTG CCCGGTCTTC TCCTCACTTC CGCAGCACCC CCCCCCCCGC 240 ACCCCCCGCC TTGGCGTCAC TGCGCTACAG GCCGCCTGTA ATTTACATAT GTTTTAACGC 300 TAACATTGGG AAGCATTGGG CCTTTCTGAA GCCTTTTTGT TTCGTTTTGT TTGAAGCTCC 360 CCTCCCCCCA GTAATGAGCC TCAGTTTGGT CCTAAGGGCT GGGTCGCCGG ATCGTAGACC 420 CAAATCCTTG CAAAATGAAC GACTCCCTCC CCTCAAAGAG GAGGGAGTTG TGTTGTTGTT 480 TTGTTTTGTT TTGTTTTTCC GCCCGTTTTC TTTTAACGGC CCCGCAGCCC TCTGTGTGGC 540 CTTGTTCCCT GTGAATAATT GCCTCACTGT TCTTCCTGGG GGCTTGCGTT TGTGAGACTC 600 AAGGTGCTAG CCTCTTCACT 620
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