| Tag | Content |
|---|
EnhancerAtlas ID | HS120-04167 |
Organism | Homo sapiens |
Tissue/cell | LNCaP-abl |
Coordinate | chr20:50142430-50143180 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| FOXC1 | MA0032.2 | chr20:50143111-50143122 | TAAGTAAATAT | + | 6.14 | | MAFF | MA0495.3 | chr20:50142487-50142502 | AAGCTGAGTCAGCAA | + | 6.91 | | MAFF | MA0495.3 | chr20:50142487-50142502 | AAGCTGAGTCAGCAA | - | 6.93 |
|
| | Number of super-enhancer constituents: 12 | ID | Coordinate | Tissue/cell |
| SE_13926 | chr20:50141645-50143383 | CD34_Primary_RO01536 | | SE_14814 | chr20:50141605-50143490 | CD4_Memory_Primary_7pool | | SE_16445 | chr20:50141290-50143056 | CD4_Naive_Primary_8pool | | SE_17143 | chr20:50141872-50143099 | CD4p_CD225int_CD127p_Tmem | | SE_17908 | chr20:50140467-50150888 | CD4p_CD25-_CD45ROp_Memory | | SE_18279 | chr20:50140715-50160222 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_19183 | chr20:50140841-50143497 | CD4p_CD25-_Il17p_PMAstim_Th17 | | SE_20095 | chr20:50140582-50150747 | CD56 | | SE_21094 | chr20:50141623-50143652 | CD8_Memory_7pool | | SE_22437 | chr20:50140448-50150715 | CD8_primiary | | SE_59040 | chr20:50140896-50172090 | Ly3 | | SE_62963 | chr20:50096434-50160258 | Tonsil |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH20I051524 | chr20 | 50140985 | 50143535 |
|
Enhancer Sequence | CTAACGCAGC ATGTGCCCCG GCCTGCCACC CACCCCCACC ACTCCCCACT TCTCCCCAAG 60
CTGAGTCAGC AACAACCCCT CCAACCTCTT CGCCGTACTT AAGCAGCTCC TGCCTCAGAC 120
GCCTTGGGTT CCCTCTGCCT GGAAACCCTC CCCGCGAGAT CCTCCCACTT CCCCTGGTTC 180
CTTCCTGCAT CTGCTCAGCC CGCACCTCCT GAGATCGACC CATCAAAAAG ATCCCCTCCT 240
TCCCTTTTCC CTGCCATCTT TTCTCCACTG ACGCCTGCTA ACAGCTCCCG TCGCACCAGG 300
TATCTGTTTA GGGAATCTCA TTCTGCCAAA CCAGGTGCAG GCAAACCACA GCCCATGGGC 360
CAAATGCGGC CCATGGGTTG TGTTTGTAAA TAGTTTTATG ACAACACAGC CAGCCTATTT 420
ATTGACACAG GGTGAACAAA GCAAGCTACA GCTTGCTCCT ATACTACAAC AGCAGAGTTG 480
GTAGTCTGGG AACCGAATGG CCCCCAAAGC CTGAAATATT TACTCCTTGG CCCTTTAGAG 540
AATTTTACAA CCCCACACTC GACCCAGAGC TCCGTCAGTG TTGGGCCCGT GTCACTGTGG 600
CCCAGCATTG TCTGCCAAGC ACCTACCACA GGGCCTGGCA CTTGCAAGCC CCCATAAACA 660
TTTGCCGAGT GGCTGAGAGA ATAAGTAAAT ATAAGAACCA TGTCCGGGGC CTGCCAGCCA 720
GAAACAAGCC CTCTTCCTGC TTTGGGGGAC 750
|
