Tag | Content |
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EnhancerAtlas ID | HS120-04100 |
Organism | Homo sapiens |
Tissue/cell | LNCaP-abl |
Coordinate | chr20:33906140-33907740 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
LMX1B | MA0703.2 | chr20:33907056-33907067 | TTAATTAAATT | - | 6.32 |
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| Number of super-enhancer constituents: 14 | ID | Coordinate | Tissue/cell |
SE_02275 | chr20:33905091-33909712 | Astrocytes | SE_26824 | chr20:33905238-33907989 | Esophagus | SE_28226 | chr20:33904907-33909177 | Fetal_Intestine | SE_29043 | chr20:33904883-33909293 | Fetal_Intestine_Large | SE_36174 | chr20:33905204-33909057 | HMEC | SE_39170 | chr20:33905039-33909136 | IMR90 | SE_44275 | chr20:33905060-33909528 | NHDF-Ad | SE_44962 | chr20:33905127-33909221 | NHLF | SE_45807 | chr20:33904873-33909959 | Osteoblasts | SE_51781 | chr20:33905671-33909330 | Skeletal_Muscle_Myoblast | SE_55706 | chr20:33904888-33910416 | u87 | SE_63567 | chr20:33905657-33909435 | HSMM | SE_64842 | chr20:33905143-33908040 | NHEK | SE_67595 | chr20:33904888-33910416 | u87 |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 3 | Chromosome | Start | End |
chr20 | 33906285 | 33906606 | chr20 | 33907005 | 33907177 | chr20 | 33906912 | 33907531 |
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| Number: 1 | ID | Chromosome | Start | End |
GH20I035317 | chr20 | 33904992 | 33910110 |
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Enhancer Sequence | TGGGTAAGTG CTTTTCCTAC TTTACCATCT GCAGGGCATT TCCAGAGATC ATCAACACAT 60 TCATCTGCAA ACCTCAGTTC TTGCTTTCCA GCAAGGCCCA CAAACATACA AACACATTTT 120 CTCCTCTTGG GATACACCTG CATTCTGGTT GGCTACTGCC CAGGAAAAAC GGAGTGCAAG 180 AGTAGAGTTC CTTACTAGCA AGGCTCCTTG ACTTCCTGGT CCTATATTCT AACTCCAGTG 240 ACCTGTAAGC TGCCTCTCCC TTCACCTCTA GCTGAGACAA TGGCAAACTG CCACAGCTAG 300 AAATGCTTTT CAGATATCAT CACCCAGGCT GGATTAGATC ATGAAAAGGG GCCTTCCTGG 360 AAGAGGGTGG AAGTGAGATC AGTACAGACA CGTGATCTGC AGGCAACAGG TGAGGGCAAG 420 TGACAGCACC TTCCTCAACT ACCGGACTCA CTCGGCAGGG CCCTTCTAGC TAGTCCAGCA 480 GCCAAGGGGA GCAGGATATT CGCTCTGGTG AATCCCTGTT GGATTTTATT CCCTCATTTA 540 AGTTTTTGGT TGCTGGTGTG CAGGTTCCCC ACCTCTCCAC TGCCAGATCA TTCTATATGG 600 AGCACTCTGC CCATGACTAC ACAGCTGCAC CCAGCAGAAG AGAAACTCCT CCCAGATAGT 660 GTTGGGCCGT TCTCTTATTA AACTCATCCT TTCCATAATG CTTTGCTTTT CATAAAAACC 720 CATACATACA ACACCACAAG GAAAAGGTTC CTTTTATATC AGTTACTCAT ATTTTCCCAT 780 TTATTTAAGC CATTAAAATT CATGCAGATA TTTTATAAGC CACCAGGATT CAGTGACTGG 840 TATTACTGAA TGTTTAATAA TAAACTAAAC AGAAGAAATC AGAGGGTTAA ATGATGACTG 900 CAATTCCTGT AATGACTTAA TTAAATTTTT ATTGAGTACA TAAACTATGA TGTCACCTCT 960 AGCCAACCAC AGGCCTGCTT TCCCAGCATG TCACAGGGAG GGAGCACTCA ATAGGAGGCT 1020 TGGCTAAATG AGCAGCAGGT CTCAGCTGAA ATGGGGAGGG GAGTGAGGCT CATGTAACAC 1080 ACTCAATAAA TTATCCGTTC ATTTTTAAAC AAAGTCCATG AGTTATAATA TATTTGCCAT 1140 GCACTTTTTA TGACATAATA AAAATGTTAC CTTAAGGATT ACTTAACACA TACTACAAAT 1200 ATTATAGCAG AGGCAGGCAC AAGGGGCAAA GAAAACAAAC ACGAGCAGGC CAGGGACGGG 1260 TCCTGGAGTT TATGTCCCAG GGGAAACAGC ATAGTATATT AAAAAGGGAA TGCAAAAAAA 1320 AGGAAGGGAT GCAAGAGTTC AGGGTTACTA ATCGGCAGAT TAATGAATGA GACAACCAAC 1380 AGAGAACACA AGTAAGGCAA TAATGAATCT TGCAGGGCAC ATGTTTAATT AAAGTAGCAT 1440 TCTCAAGGAG GAATATTAGC TTTAAAGAGA TGCCAGTTCA TTTGAGGCCA ATTCGCTGCT 1500 CTCTTTCCCC TTTTCACTGT TGCTGCCTTA AAGATATTTA TGTGACTGCT TAACAGAGGA 1560 ACCAGACTAT GTGGATACAG GGACTGATGG GAGATCAAGT 1600
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