| Tag | Content |
|---|
EnhancerAtlas ID | HS120-04060 |
Organism | Homo sapiens |
Tissue/cell | LNCaP-abl |
Coordinate | chr20:25213620-25214590 |
Target genes | | Number: 10 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| SCRT1 | MA0743.1 | chr20:25214053-25214068 | AGCCACCTGTTGAGT | - | 6.54 | | SCRT2 | MA0744.1 | chr20:25214055-25214068 | CCACCTGTTGAGT | - | 6.2 |
|
| | Number of super-enhancer constituents: 11 | ID | Coordinate | Tissue/cell |
| SE_02209 | chr20:25213606-25214599 | Aorta | | SE_23378 | chr20:25213391-25214608 | Colon_Crypt_1 | | SE_27519 | chr20:25213373-25214671 | Esophagus | | SE_36274 | chr20:25213376-25214813 | HMEC | | SE_40630 | chr20:25213347-25214606 | Left_Ventricle | | SE_41813 | chr20:25213462-25214438 | LNCaP | | SE_42625 | chr20:25213624-25214623 | Lung | | SE_47363 | chr20:25212585-25214726 | Panc1 | | SE_48678 | chr20:25213377-25214594 | Right_Atrium | | SE_50579 | chr20:25213361-25214597 | Sigmoid_Colon | | SE_65094 | chr20:25213483-25214636 | NHEK |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH20I025232 | chr20 | 25213275 | 25221037 |
|
Enhancer Sequence | TTGGTGGTTG CCAGGAGCTG GGGTTGGGAG AAGGAAGAGT AACTGACTGA CTGGTGCGCA 60
GGGCTTTTGA AAAAGTTTAA CACTTAGATT ATGGTGCTGC TCACACAACT CCATAAATAT 120
ACTGTAAACC ATGGACTTGT GCACTTAAAC AGGCAGCTTT CTGGTATAAA AATTACATCT 180
CAGTAAAGCA GTTTGAAAAA TGAAGACTCG AACTCTAGAA GGCAACAGTC TGAAAACAAT 240
AGGTTTCCTC CAGAAAGTTC CGCTGAGGTA AAGCTCATTC TAGTCTGAGA GCAGATGACC 300
TTCTCTTGTC TTTTCAAACC TTAGACTTCA GTGTTGTCCT TGCCTCACCT TAGACCCTGA 360
GAGGAGCATC AGACCTGCTC GTTCGCTGGT GAACCCAAGT CCAGCAGGTG CTGCCCTGGT 420
GCGGGGGTCC CTCAGCCACC TGTTGAGTGA CGGGAGGTTG CCTCTAAAAA GGAGAGGAAT 480
TGAAATCCTC ACACTGGGGA TATTGGTCCT CCTCCACACC CCCACCCCGG CATTTCCTAG 540
TGCAGCCAGC GATCCTCCTG TTTTCTCAGT GGGTGTGCCT GGCCTGGACT CCACCCAAGC 600
CAAACAGCCG AGGTGAAATG GTTGGGCAGA GCAAACAGGC TTTTGCCAGG AGCCTTGCTT 660
TACTTCCCCT TGGACAAATC ACACTGGGCT TAAAGCCTCC ACTGGAATTC CTCCTGCTGC 720
TGTGAGGCCC AGAGTGGCCA CATCCCCTGC CTGATGGGGT CTTGAGTCAC TAGCTCTCTC 780
TGGGTTTTAC CTTGACCTAG TGAATGTTTT TCTAAGAATA TTTTATTATT GAGGTATCAT 840
TTTCATATAA TAGTGAAGGG GTGGGTTGCC CCTCCACACC TGTGGGTGTT TCTCATTAGG 900
TGGAACAAGA GACTTGGAAA AGAAAGAGAC ACAGAGACAA AGTAGAGAGA AAGAAAAAAG 960
GGGGCCCAGG 970
|
