EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS120-03995

Organism

Homo sapiens

Tissue/cell

LNCaP-abl

Coordinate

chr20:633020-633610

Target genes

Number: 12
Name	Ensembl ID

SOX12	ENSG00000177732
SCRT2	ENSG00000215397
SRXN1	ENSG00000172070
TCF15	ENSG00000125878
RBCK1	ENSG00000125826
TRIB3	ENSG00000101255
NRSN2	ENSG00000125841
ZCCHC3	ENSG00000177764
C20orf96	ENSG00000196476
DEFB132	ENSG00000186458
RP5	ENSG00000225377
AL034548.1	ENSG00000247315

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

NR2C2	MA0504.1	chr20:633056-633071	TGACCCTTGACCTCT	-	7.13
Nr2f6	MA0677.1	chr20:633056-633070	TGACCCTTGACCTC	-	7.12
Rxra	MA0512.2	chr20:633056-633070	TGACCCTTGACCTC	-	7.01

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

SE_40126

chr20:632006-635606

K562

Enhancer Sequence

TCCGGTATTC TTAACACCCT TCCTCAGTGG TGGAGCTGAC CCTTGACCTC TCCCACTTCC 60
CATTCAGACA AGGGCCTCCC AGCAGATATG ACACACCTAG TCCCACTGTC ACTGACTGTC 120
ACAGCCATGA GAGCCCACGG CTTATCTCCG GGTAGTGCGG TGGCCATGTG CTGGGCAGTG 180
GGGCCCAGGC TGCCTGGGTG TGAATTCCAG CCGTGTCACT TTTTAAGCGC CTGATCTTAG 240
TCAAGCCGCT GAAATCTTCC CTGCCTCAGT TCTCGTCTGC AAAAGAGCCA CTATCTACCT 300
CCTAGGGTTG GCATAGGAAA CTGAGGGACT TCCTGCAGTT CCTGGACCAC TGCAAGCACT 360
AGCGTTATAA GCGTTATCAT CACTACTTTA ATTATCTCGC CCAATTCCCT CCTTGCTCAA 420
GTGAGGAAAC AGAGGCCCAG AGAGGCCCAG CTACTTGCTC AAGGTCACAC AGCAGAGGCT 480
GAGCTCCGGC TGGGCCCGGA ACCAGTCCGT CTCGCGTCCA TCGCAGCGAC CTCCCTCCTC 540
CGGCAACCTC CCTCCTCCGA AGCCCTCCCT CCGGTTGGCT GGACTCCCCG 590