EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS120-03508

Organism

Homo sapiens

Tissue/cell

LNCaP-abl

Coordinate

chr19:53606000-53606510

Target genes

Number: 14
Name	Ensembl ID

ZNF83	ENSG00000167766
ZNF611	ENSG00000213020
ZNF600	ENSG00000189190
CTD	ENSG00000255875
ZNF320	ENSG00000182986
AC010487.1	ENSG00000213793
ZNF816	ENSG00000213801
ZNF321P	ENSG00000221874
ZNF160	ENSG00000170949
ZNF415	ENSG00000170954
ZNF347	ENSG00000197937
ZNF765	ENSG00000196417
ZNF761	ENSG00000160336
TPM3P6	ENSG00000250731

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ZNF263	MA0528.1	chr19:53606156-53606177	CGAGGAGGAGGGAGGTGGGGG	+	6.47
ZNF263	MA0528.1	chr19:53606159-53606180	GGAGGAGGGAGGTGGGGGGCG	+	6.93

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

SE_28039	chr19:53597374-53607609	Fetal_Intestine
SE_28957	chr19:53596923-53607586	Fetal_Intestine_Large

Enhancer Sequence

ATGTCTGCAT GTTGGAGGAG TACATTTTCC AGGGGGTGGA GCTGGGCAGG CAAAAACACC 60
GGGTGTCACA GGACGGGCCC CGGGCACCTC CCCAACGAGG GCTCAAGGGA AGCGGTGACT 120
GCGAAGGGGA GGCCTGGGGA GCAGCAGGGC CCGGCACGAG GAGGAGGGAG GTGGGGGGCG 180
ACGGCGCCTT AGGACAGGGG TGGGATGTGC AGGATCCCAG GACCAGGCGG AGGCGCGGCC 240
TCCCCGGGAC TGGGTCGGCG GCGCTGCGCT CCAGGGGCCG ACGAGAGCGA GGCTGGGAGG 300
CGCCCAGGGC AGGCGGTGAG GACTTTAAGC GATGCGGGGC GGGAGGAGGA GTCAGTAAAG 360
GATTTTAAGC AGGAAAATCC TGCTTAAACG TTTAAAAAAC CGGGAAAGGC CGTGTTTACT 420
TGGCCCAAGG CAGAAAGACC GGGGGCAGGG ACCAGCCTCA GGGCGACTTT AACCCAAAAG 480
GAAGCGTCTC CGGGCCCACA CAGCAAGGCC 510