EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS120-03405

Organism

Homo sapiens

Tissue/cell

LNCaP-abl

Coordinate

chr19:41284300-41284560

Target genes

Number: 16
Name	Ensembl ID

HIPK4	ENSG00000160396
SERTAD3	ENSG00000167565
BLVRB	ENSG00000090013
SHKBP1	ENSG00000160410
U6	ENSG00000223284
ADCK4	ENSG00000123815
ITPKC	ENSG00000086544
C19orf54	ENSG00000188493
SNRPA	ENSG00000077312
MIA	ENSG00000261857
RAB4B	ENSG00000167578
EGLN2	ENSG00000171570
CYP2T2P	ENSG00000233622
CYP2F1P	ENSG00000237118
CYP2A7	ENSG00000198077
CYP2G1P	ENSG00000130612

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

SP1	MA0079.4	chr19:41284358-41284373	AATGGGCGGGGCTTT	-	6.24
SP1	MA0079.4	chr19:41284380-41284395	AGGGGGCGGGGTCTG	-	6.36
SP2	MA0516.2	chr19:41284357-41284374	GAATGGGCGGGGCTTTG	-	6.64
SP4	MA0685.1	chr19:41284378-41284395	TCAGGGGGCGGGGTCTG	-	6.11
SP4	MA0685.1	chr19:41284356-41284373	GGAATGGGCGGGGCTTT	-	6.45

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

SE_11640

chr19:41282119-41287165

CD20

Enhancer Sequence

GGGTGGTGGA CGAAGCTGGG GTCCTGGGTC TGGGCCCAGG GAGGATGCGG CCTGTGGGAA 60
TGGGCGGGGC TTTGTAGATC AGGGGGCGGG GTCTGGTGTG ATGGAGGCAG GACCTAAGTG 120
GATGCTGGGA GGGGTTTAGT GGGTCTGAGG CTGAGCTTAA TCGATTTAGG TGGAGCCTGA 180
GGGTCTGGTG CGTGGGTTAA ATAGATCTGG GGCGGGATTT GAGGGAGCTG GTCCTGAGGG 240
GTTCAGGGAG GCCCTGAGGG 260