EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS120-03390

Organism

Homo sapiens

Tissue/cell

LNCaP-abl

Coordinate

chr19:39997390-39997670

Target genes

Number: 16
Name	Ensembl ID

PAK4	ENSG00000130669
CTC	ENSG00000213926
GMFG	ENSG00000130755
SAMD4B	ENSG00000179134
PAF1	ENSG00000006712
MED29	ENSG00000063322
ZFP36	ENSG00000128016
PLEKHG2	ENSG00000090924
RPS16	ENSG00000105193
AC011500.1	ENSG00000213922
SUPT5H	ENSG00000196235
TIMM50	ENSG00000105197
DLL3	ENSG00000090932
EID2	ENSG00000176396
AC005205.2	ENSG00000244253
ZNF780B	ENSG00000128000

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Lhx3	MA0135.1	chr19:39997490-39997503	GAATTAATTATTC	+	6.46
ZEB1	MA0103.3	chr19:39997622-39997633	GGGCAGGTGGG	-	6.14

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH19I039506

chr19

39996957

39999009

Enhancer Sequence

AGGGTTCAAA CACGTAGTTC TGGGAGCTGT CTACTATTGA AGTATGATCG AAGCCGAAGG 60
AAAAAGAGAC AAGGGCACCG AGAGCCAAAG AGGTGGAGCT GAATTAATTA TTCCAAAACT 120
TCATTAGGAA GAAAAGCGAG CTGGCTTTCC TGGCACACTC CAAGACGCTG GCCCTTAAGT 180
TAGAGAGAAA AAGGGGACCC CGTGCAGCGA TGACAGAGCT GGGAAACAGC GCGGGCAGGT 240
GGGTCCCCGG CTCCCGGACT GCGCCCTCTG ATGCTCCCTT 280