EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS120-03376

Organism

Homo sapiens

Tissue/cell

LNCaP-abl

Coordinate

chr19:38894340-38894720

Target genes

Number: 12
Name	Ensembl ID

AC011465.1	ENSG00000221258
DPF1	ENSG00000011332
SPINT2	ENSG00000167642
C19orf33	ENSG00000167644
KCNK6	ENSG00000099337
CATSPERG	ENSG00000099338
snoU13	ENSG00000238838
PSMD8	ENSG00000099341
GGN	ENSG00000179168
SPRED3	ENSG00000188766
FAM98C	ENSG00000130244
RASGRP4	ENSG00000171777

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

MEF2A	MA0052.3	chr19:38894702-38894714	GCTATTTTTAGT	-	6.18
MEF2B	MA0660.1	chr19:38894702-38894714	GCTATTTTTAGT	-	6.62

Enhancer Sequence

CCCGGGATGC AGAAGTGGCA AGGCCATGGC CTCCGGAGCG GCGGGCTCTG ACTTTTTAGG 60
GGAAATCGAG GTTCCCAAGG GGTGTGGTCA GAACTTTGGG GCGGCCCAGA GGGTACGAGG 120
TGGGTGGGGT GAGCATGTTG GGGCAAGCAG AGCGCTCTAA AATGGGCGGG GGTAGAATTT 180
CGTTTTATTT TTTATTTATT TTATTATTAT TATTTTTGAG ATGGAGTTTC ACTCTTGTTA 240
CCCAAGCTGG AGTGCAGTGG CGTGATCTCG GCTCACTGCA ACCTCCACCT CCCAGGTTCA 300
AGTGATTCTC TTGCCTCAGC CTCCCGAGTA GCTGGGATTA CAGGCGCGCG ACACCACACT 360
CGGCTATTTT TAGTAGAAAC 380