| Tag | Content |
|---|
EnhancerAtlas ID | HS120-03318 |
Organism | Homo sapiens |
Tissue/cell | LNCaP-abl |
Coordinate | chr19:30176090-30176960 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Mafb | MA0117.2 | chr19:30176454-30176466 | AGTCAGCATATT | - | 6.52 | | Myod1 | MA0499.1 | chr19:30176367-30176380 | GGCAGCTGTTCCT | + | 6.36 |
|
| | Number of super-enhancer constituents: 5 | ID | Coordinate | Tissue/cell |
| SE_01995 | chr19:30175814-30176541 | Aorta | | SE_41671 | chr19:30175972-30176510 | LNCaP | | SE_48180 | chr19:30175725-30176805 | Psoas_Muscle | | SE_48180 | chr19:30176862-30180018 | Psoas_Muscle | | SE_51595 | chr19:30175478-30180334 | Skeletal_Muscle |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH19I029685 | chr19 | 30175914 | 30176526 |
|
Enhancer Sequence | AAACACTAGG TACATAACTA GGAGTGGAAC TGGCCCACCG GGTATATGCA TATCTGATTG 60
AGTAGAGGCC GCCAGTTTTC TGTAGTAGTT ACATGAATCT GCACTCCACT GGTGTGTATG 120
AGGGTTCCAG TTGCTCCACG CCCTCACCAG CACTTGGTGT TTTCAGTCCT TTCACTGTGA 180
TCATTCTGGT GGGTTACTTG GAATACAGGT CTCAGACACT GTCCTGGAAT CGGAGCTCGC 240
CTCACCAGTT TCATGGGGTC GGTCTGGGGA CGGGAGGGGC AGCTGTTCCT CCAGCATTCA 300
GGCAGAGCGG GTGCCTGAGA CTGACATCGT GTGGGTGTTA GGCCCAGTTC CAAACCAAAG 360
AGGCAGTCAG CATATTTATG GCATGCACAG GTTGGCATTG GTGCAAAAAA TGAAAGAGGA 420
GAAAACTGCC CGCCAGCTTT TAAATATTTT ATTTATTCAT TCAGCAAATA TTTGAGTACC 480
TACAAGCACT GGGGCTACAA TGGTAAATAA GACAAAAATC TCTCCCCTCT GGGAGTCCAC 540
TCTAGTGAAG GGAGACAGAC AGTAACTACA ACTGAAAGTG TGTTAGAGTG GCCGGGCACG 600
GTGGCTCAGG CCTGTAATCC CAGCACTTTG GAGGCCGAGG TGGGTGGATC ACGAGGTCAG 660
GAGTTCGAGA CCAGCCTGAC CAACATGGTG AAACCCTGTC TCTACTAAAA ATACAAAAAT 720
TAGTTGGGTG TGGTGGTGCA TGTCTGTAAT ACCAGCTACT CGGGAGGCTG AGGCAGGAGA 780
ATTGCTTGAA CCTGGGAGGC GGAGGTTGCA TTGAGCCAAG ATCGCACCAC TGCACTCCAG 840
CCTGGGCGAT AAAGCGAGAT TCCATCACAA 870
|
