Tag | Content |
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EnhancerAtlas ID | HS120-03280 |
Organism | Homo sapiens |
Tissue/cell | LNCaP-abl |
Coordinate | chr19:18228310-18229320 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
EGR1 | MA0162.3 | chr19:18228781-18228795 | CCCGCCCCCGCACT | + | 6.21 | EGR3 | MA0732.1 | chr19:18228780-18228795 | CCCCGCCCCCGCACT | + | 6.83 | EGR4 | MA0733.1 | chr19:18228780-18228796 | CCCCGCCCCCGCACTC | + | 6.16 | KLF14 | MA0740.1 | chr19:18228423-18228437 | GGGTGGGCGTGGTA | - | 6.08 | KLF16 | MA0741.1 | chr19:18228599-18228610 | GCCCCGCCCCC | + | 6.02 | KLF16 | MA0741.1 | chr19:18228764-18228775 | GCCCCGCCCCC | + | 6.02 | KLF16 | MA0741.1 | chr19:18228779-18228790 | GCCCCGCCCCC | + | 6.02 | KLF5 | MA0599.1 | chr19:18228599-18228609 | GCCCCGCCCC | + | 6.02 | KLF5 | MA0599.1 | chr19:18228764-18228774 | GCCCCGCCCC | + | 6.02 | KLF5 | MA0599.1 | chr19:18228779-18228789 | GCCCCGCCCC | + | 6.02 | SP1 | MA0079.4 | chr19:18228761-18228776 | CAGGCCCCGCCCCCA | + | 6.56 | SP3 | MA0746.2 | chr19:18228424-18228437 | GGTGGGCGTGGTA | - | 6.37 | SP4 | MA0685.1 | chr19:18228761-18228778 | CAGGCCCCGCCCCCAAC | + | 6.57 | SP8 | MA0747.1 | chr19:18228424-18228436 | GGTGGGCGTGGT | - | 6.32 | Zfx | MA0146.2 | chr19:18228761-18228775 | CAGGCCCCGCCCCC | - | 6.19 |
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| Number of super-enhancer constituents: 15 | ID | Coordinate | Tissue/cell |
SE_03607 | chr19:18228860-18229540 | Brain_Angular_Gyrus | SE_04405 | chr19:18227552-18228448 | Brain_Anterior_Caudate | SE_04405 | chr19:18228707-18231550 | Brain_Anterior_Caudate | SE_05422 | chr19:18228732-18231107 | Brain_Cingulate_Gyrus | SE_06334 | chr19:18227733-18231497 | Brain_Hippocampus_Middle | SE_07235 | chr19:18227822-18231343 | Brain_Hippocampus_Middle_150 | SE_08343 | chr19:18228675-18231084 | Brain_Inferior_Temporal_Lobe | SE_10753 | chr19:18227967-18228613 | CD19_Primary | SE_10753 | chr19:18228829-18231042 | CD19_Primary | SE_19731 | chr19:18227880-18228741 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_19731 | chr19:18228750-18231627 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_22919 | chr19:18227678-18228683 | CD8_primiary | SE_22919 | chr19:18228828-18231785 | CD8_primiary | SE_60731 | chr19:18199190-18231325 | DHL6 | SE_62682 | chr19:18196873-18231497 | Tonsil |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
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| Number: 1 | ID | Chromosome | Start | End |
GH19I018117 | chr19 | 18228011 | 18232079 |
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Enhancer Sequence | GGGACCCTAA GGAGCCCCCA GCCTGGGGAA GACATAGCCG GACAGACAGG AAAGCGGGTT 60 TTTCAGAGGA GAGGACGCAG TTTTGCCAGG CTAGATTCCA AGCAGTGGGG CCAGGGTGGG 120 CGTGGTAGCA TGAGCCGGCC AGGACGCTGG GGTGGGTCTT GGGTGCCGCA CTGAGAAGGG 180 GTCAGTGCTC TGGGAGAGAG GAAAAAGATG GAGGGAGCGA TTAGATTTAC ATTTTAGCAG 240 AAAGGAGCCA AAATGCCTGC CCCTAGCTCG AGGTTAAGGT GCTGCCAACG CCCCGCCCCC 300 GCCGCCCGCG GTCGTAGCAA CGCCCGGCCT CAGCCGCCCG CGGCCCTAGC AACGCTCCGC 360 CTCTCCGCCC GCGGCCATGG CAGCGCCCCG CCCACTCGCC GGCACGCGGG TCCGCCGGCC 420 TCGCTTCCGC GTCGCTCGCT CCGCCTCCCG ACAGGCCCCG CCCCCAACGG CCCCGCCCCC 480 GCACTCGCCT GGGCGGAGTT CCAGTCGCGC TCGGGGGCGC GCGCTTCCTT CTCGCCGCCC 540 CCCCATCCCC GCAGCCCCGT GCGCCCCCCT CCCTGTCCGG CTCCGCGGGG CTCCTGGGGC 600 CGATCCCACC GCCGAGGCCT CCCTTCCCGG CCTCGGGCGG CTGCGGCGGC ACAAAGGGAA 660 GCAGCATGTC CGACCCCAGC TACTGGACGG CGGTGGCGGC TCCCGGCCAT CGGAGCCGCC 720 TGGCAAAAGG CGCGCTGCTG CAGCGCTCCA AGAGGTAGGG GGCACGGCGC CGGCGAAGGC 780 TCGGCGGCCA GCCGAGCAAA CAGGAGTTGC CAGAAGTGTG TCCTGGCCGC GTGGCGCGGA 840 CCACGGCGAG CGTCTGTCTG TGGCAGCAGT GGGAAGGGGG GAGGACGCCT GTGGATCGAG 900 GTGTCCCCTG GGGTCCCTGG CACCCTCCTT TCGCCCCTCG TTCCCTGGAC TGGGGTGTCT 960 GTCCGCCAGC GTCGCAGCTG GGGTGGTGAC AGACAGGAGT GAGTTGAGAT 1010
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