EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS120-03204

Organism

Homo sapiens

Tissue/cell

LNCaP-abl

Coordinate

chr19:11615800-11616300

Target genes

Number: 13
Name	Ensembl ID

LDLR	ENSG00000130164
ELAVL3	ENSG00000196361
ZNF653	ENSG00000161914
AC008481.1	ENSG00000244080
CTC	ENSG00000213304
ECSIT	ENSG00000130159
CNN1	ENSG00000130176
ELOF1	ENSG00000130165
ZNF833P	ENSG00000197332
HNRNPA1P10	ENSG00000214223
ZNF441	ENSG00000197044
RN5S465	ENSG00000212497
Y	ENSG00000199444

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF16	MA0741.1	chr19:11615959-11615970	GGGGGCGGGGC	-	6.02
KLF5	MA0599.1	chr19:11615960-11615970	GGGGCGGGGC	-	6.02
SP2	MA0516.2	chr19:11615957-11615974	GAGGGGGCGGGGCTGCC	-	6.19
SP4	MA0685.1	chr19:11615956-11615973	TGAGGGGGCGGGGCTGC	-	6.17

Enhancer Sequence

GGGTCCCCCG GATGTGTTGG ATCTAGGGTT GTGGGAATGG GGCCATACGG AGTCCCAGAT 60
GGGGCACCAG AACTTCAAGA AGGGCAGGGC TGAGTGCCCC AGGGTGTCCA GAGTCCCAGG 120
CCAGGTGGGG AACTAAGCGG GGGAGGATGA GACCGGTGAG GGGGCGGGGC TGCCCCCCCA 180
GGGCCTGGTT AGTTACAAGG CCTGGAGGTG GGGCCAGTCC CAGGATTGGG CCGCCAGAGT 240
TCTAGCGGGC GGGGCCAAGC GCTCAGAAGG CGGGTCGAGG GGCTGGGTGC ACCCTAGGAT 300
TGGGCAGTCG GAACGATGGG AGGCGGGGCC ACGAGCCAGG CGCGTCCCGG CCAGGCAGTA 360
CGAGACCCAG GCCGCCGGCC CGGCTCCTGG GCGGGGTCCG CAGGTGCCGG GGGCTGGCCC 420
TAGAAGCGGA GGGGGCGGGG TAAAGCCCGG CGGGGTCTGG GGGCGTCTCC TCCCTCCCTC 480
CCTCGGGGCC AGGCCCCCTC 500