| Tag | Content |
|---|
EnhancerAtlas ID | HS120-03128 |
Organism | Homo sapiens |
Tissue/cell | LNCaP-abl |
Coordinate | chr19:4083950-4084570 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| EWSR1-FLI1 | MA0149.1 | chr19:4084376-4084394 | TCTTCCTCCCTCCCTCCC | - | 6.36 | | MYCN | MA0104.4 | chr19:4084542-4084554 | GGCCACGTGGCC | + | 7.22 | | MYCN | MA0104.4 | chr19:4084542-4084554 | GGCCACGTGGCC | - | 7.22 | | ZNF263 | MA0528.1 | chr19:4084371-4084392 | CCCCTTCTTCCTCCCTCCCTC | - | 6.14 | | ZNF263 | MA0528.1 | chr19:4084310-4084331 | GGAAGAGGAGCGGAGGGAGGG | + | 6.48 |
|
| | Number of super-enhancer constituents: 20 | ID | Coordinate | Tissue/cell |
| SE_00903 | chr19:4083864-4084455 | Adrenal_Gland | | SE_02962 | chr19:4083523-4085082 | Bladder | | SE_12453 | chr19:4083727-4085036 | CD3 | | SE_19502 | chr19:4083630-4085257 | CD4p_CD25-_Il17p_PMAstim_Th17 | | SE_20194 | chr19:4083237-4085170 | CD56 | | SE_22707 | chr19:4083615-4085191 | CD8_primiary | | SE_23073 | chr19:4083139-4085071 | Colon_Crypt_1 | | SE_23728 | chr19:4083583-4084973 | Colon_Crypt_2 | | SE_24683 | chr19:4083592-4085030 | Colon_Crypt_3 | | SE_26575 | chr19:4082693-4085061 | Esophagus | | SE_27700 | chr19:4083659-4085066 | Fetal_Intestine | | SE_28696 | chr19:4083692-4085120 | Fetal_Intestine_Large | | SE_31428 | chr19:4083442-4085057 | Gastric | | SE_42412 | chr19:4083527-4084881 | Lung | | SE_50061 | chr19:4082762-4085231 | Sigmoid_Colon | | SE_53358 | chr19:4083688-4084969 | Spleen | | SE_55380 | chr19:4083851-4084635 | Thymus | | SE_58113 | chr19:4083508-4084948 | VACO_9m | | SE_62529 | chr19:4051126-4090382 | Tonsil | | SE_65287 | chr19:4083611-4084987 | Pancreatic_islets |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH19I004082 | chr19 | 4082946 | 4085145 |
|
Enhancer Sequence | CCTGCCTCAA ACAAAAACGT AAACAAAACA GGAGGCCCTG CTCTCCTGAG GGGCTGGTGG 60
TGAGTCACTG GTAGATGGGA GAGAGCTGGG GTCAGGGTCC CAGCTGGGGG GGTGGGTCCT 120
CACCTGTGCT ACCCTCCAGG GGGCCTCTCT CCAGGCCTCT GTCCCTCCCC TGGGAAGCCT 180
GGCAGAAACC TGAGACTGGG CCTCCAGTTC CAGGTCGCCA CTGGGCCCAG GCCTCTCCTG 240
TCCGCCTGCC AGGGACTGCG GAACAGGTAA CTCCTGCGCC ACCCTAAACC CACCTGGCCT 300
GTTGCTCCAG GTGCGGCCTG GAGGCCCCGG GGCCTGCACA CCTGGTCAGC TCAGAGGCCA 360
GGAAGAGGAG CGGAGGGAGG GGTGGGGCCG CCGGCCGCTG CTGGTTTCGT TTTGAGCCGG 420
GCCCCTTCTT CCTCCCTCCC TCCCACTCCT CGCCAGACCC CTGCATTCTG GGAAAGGCTG 480
TGACAACTTC CTCTGAACTC TCCTTAACCT GCCCTGGAGC CCAGGGCCTC CAGGAGGCTG 540
AGTTCCGCCT GCGGGACCTG AGGCTTCCTG CAGGTCACAC ACCTCCACCC CTGGCCACGT 600
GGCCCTAGAC CGCCCACCTT 620
|
