| Tag | Content |
|---|
EnhancerAtlas ID | HS120-03106 |
Organism | Homo sapiens |
Tissue/cell | LNCaP-abl |
Coordinate | chr19:2164960-2165850 |
Target genes | | Number: 26 | Name | Ensembl ID |
|
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr19:2165546-2165567 | GGACAAAAACTGAAAGCAGAG | - | 6.26 | | SP1 | MA0079.4 | chr19:2165323-2165338 | TGGGGGCGGGGTCAG | - | 6.14 |
|
| | Number of super-enhancer constituents: 8 | ID | Coordinate | Tissue/cell |
| SE_01122 | chr19:2164932-2165902 | Adrenal_Gland | | SE_27063 | chr19:2162254-2166322 | Esophagus | | SE_34517 | chr19:2163165-2172243 | HCT-116 | | SE_45235 | chr19:2164122-2166090 | NHLF | | SE_51032 | chr19:2163245-2165890 | Sigmoid_Colon | | SE_52998 | chr19:2163254-2166024 | Small_Intestine | | SE_57584 | chr19:2164663-2165344 | VACO_503 | | SE_65616 | chr19:2162124-2174662 | Pancreatic_islets |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
Enhancer Sequence | CCCCGGAGTT AGTAAATTTT GTCTTCTTCA TCTTGGTGAC CGTTGGAAAA TGACAGGCCG 60
GGTGGAATGT TACAGAGGCA CCCCACCGGG TGGTTCCAGA AACCCGCGTG CGGCTCCCGG 120
GGTGCGAGTC CCGGCGTGGC CCCTGAGGAG GCGGGGCGCG TGCGTCCGCG CTTGGGACCC 180
TCTGGCCACG CTCCGGGCTG GGCAGGGCGC GTTTTCGGGG AAAAGTGAAG CAGGCGCTGT 240
CAGCGAGCGT GTCCGGGGCG CGAGTTTTGG GGGGCGCGTC TGCAGGGCCC GGCCGGGCAT 300
CCCCGCGCGC CCTGGGACTC CCGCGCGCGC TGGGCTTGTG TCAGTTTTTG GAAACGTGCT 360
CGCTGGGGGC GGGGTCAGGA CGCGGAGAGC GCTGGGGAGC CCGGGCTGGC TCACTGCCCC 420
GGGTCGGTGC GAGTGGATGG GAGAGGGAGC GCAGCTTCCA GCCTGGCCGC ACGTCCCGCG 480
CGCGGGGCTG GCGGGGTAGG GCCCTGGGGC TCTGGCTTCT CTGGTTGGGC AGCTCCGGGT 540
GTGCGCCTGG GCGGCCTGAG CCGGGATCCC GCCAGGAGAG GTCCTAGGAC AAAAACTGAA 600
AGCAGAGGCC GCGCTTCAGC GCCCCGACCG GTTTCCTCCC TCGAAAGTTC AAACTCCAGA 660
ACCCTTCCAG CCTCCACTTC TCTCTGTTGG GCTCTCATCG TTTTAGGTGG TAGAAGGCAT 720
ATGACCATAA GAGTTCTAAC TGTAACTGAC TGAAGATCAA TTGAGGTGGC TTACCACCGT 780
CCGACCAGCC CCAGTACATG GCTTCACATT TTTTTTTTTT TTTTTGAGAC GGAGTCTCGA 840
TCTGTCGCCA AAGCTGGAGT GCAGCGGCGC GATCTCGGCT CGCTGCAAGC 890
|
