| Tag | Content |
|---|
EnhancerAtlas ID | HS120-02954 |
Organism | Homo sapiens |
Tissue/cell | LNCaP-abl |
Coordinate | chr17:79353210-79353520 |
Target genes | | Number: 11 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| EWSR1-FLI1 | MA0149.1 | chr17:79353347-79353365 | GGAAGGATGGCACGAAGG | + | 6.92 |
|
| | Number of super-enhancer constituents: 11 | ID | Coordinate | Tissue/cell |
| SE_04104 | chr17:79352449-79353819 | Brain_Anterior_Caudate | | SE_05082 | chr17:79352313-79353869 | Brain_Cingulate_Gyrus | | SE_05872 | chr17:79352256-79353760 | Brain_Hippocampus_Middle | | SE_06852 | chr17:79352156-79353813 | Brain_Hippocampus_Middle_150 | | SE_23211 | chr17:79352656-79353798 | Colon_Crypt_1 | | SE_24189 | chr17:79353080-79353769 | Colon_Crypt_2 | | SE_26559 | chr17:79352968-79353722 | Esophagus | | SE_31439 | chr17:79352877-79353802 | Gastric | | SE_34246 | chr17:79352295-79353883 | HCT-116 | | SE_41954 | chr17:79353015-79353780 | LNCaP | | SE_65328 | chr17:79352712-79353814 | Pancreatic_islets |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH17I081379 | chr17 | 79353152 | 79354170 |
|
Enhancer Sequence | GGGGGATGCT GGGGCAGAGC CCAGGAGCTG GAGGGGAAGC AGGCGGGGAG AGAGCAGAGC 60
CCCGCTGAAG GGAGCCACAG TGAGCCCTGG GCACAGGTGG GACAGGCCTC GAGTCCTCCT 120
TGGCCAGGAG ACTCCCAGGA AGGATGGCAC GAAGGCAGGG GTGGGCCGCC AGGAGCCTGC 180
GGAGCCCGTC CACATCTGCC AGGCACCGCC TGTACGACAG GCCAGCTCCC AGCGTGGTTG 240
AGGTCCCAGG TCCCTCCGGC GCCCAGCAAT GCCCGGGTCC CAGACAGGAC AAGTTCCTGC 300
CTCCCTCTTA 310
|
