| Tag | Content |
|---|
EnhancerAtlas ID | HS120-02901 |
Organism | Homo sapiens |
Tissue/cell | LNCaP-abl |
Coordinate | chr17:73389850-73390670 |
Target genes | | Number: 13 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| EWSR1-FLI1 | MA0149.1 | chr17:73390258-73390276 | CCTGTCTCCCTCCCTTCC | - | 6.21 | | EWSR1-FLI1 | MA0149.1 | chr17:73389957-73389975 | CCCTCCTCCCTCCCTTCC | - | 7.46 | | SP8 | MA0747.1 | chr17:73389928-73389940 | CCCACGCCCCCT | + | 6.04 | | SPIC | MA0687.1 | chr17:73389999-73390013 | TTCTTCCTCTTTTC | - | 6.47 |
|
| | Number of super-enhancer constituents: 3 | ID | Coordinate | Tissue/cell |
| SE_09177 | chr17:73387878-73394048 | CD14 | | SE_11553 | chr17:73349943-73394321 | CD20 | | SE_18858 | chr17:73388045-73391677 | CD4p_CD25-_Il17-_PMAstim_Th |
|
Enhancer Sequence | AGCAGGAGAG GGACGATTAA GAGCAGTGGC CAGGATTGAA GGCAACCCCG CCCTGCCAAT 60
CGGCCTGCTG TCCCAGCCCC CACGCCCCCT GGCTCGGCCT GGCTCAGCCC TCCTCCCTCC 120
CTTCCAGGCA ACAGCCCCCC CCCGCCGACT TCTTCCTCTT TTCAGCCTCG GCCCCCAGGC 180
GACTGACAGG CCTGCCGGCC AATGGCACAG CTGCCTGAGC TATTCCTGAA CACACTTCCT 240
CTTCCTTCCC GCTGGGTGTG CACTGCGTGC AGGAACCGGC TGGAGTCCCA CTCAGTCTCC 300
GCCTTTCCTC CTTTACTCCT CACAGGCTCT TCTCCAGCAC CAAATACGGT CCACTGAAAG 360
GAAGGCCTCA CCCTGGGGAT GGCACCTGTC TCTTCTCGGT TAAACAGGCC TGTCTCCCTC 420
CCTTCCCCAC CGCCATCCTT TCTGGTCTTC TGAGAATGCT GGCTTCCCTA CTGCACAGTC 480
AAGAGCAAGC AAAGCAAAAC TCTTTGGTCT CGAGCTGCTG CACTCTTCTC GAAACTAAAC 540
CATGATCTGC TCCCAGGAGA GCAGGAGAAA GTAAATGTAG GAACTGCTTT TTCAATCCAT 600
TTACTGCTAC AAGCACCGGC GGCTTTCCCC CTGCACTTCC ATGTTGTGAT CGGCAAGCTC 660
AGGTAACCAG AGAAAGATCA CAGCTCCAAG CTGTGTACCA GTGGAAATGG TGGGGATGAC 720
GCTCTTGCAT AAGGCTCCCT TTCCCCGGCA GATCCCCAAG ACTCTGGGGT CCCCACCAGG 780
AATGAAATAA ATGACCAAGG CTCAGCACTC CAGAAATAGC 820
|
