| Tag | Content |
|---|
EnhancerAtlas ID | HS120-02735 |
Organism | Homo sapiens |
Tissue/cell | LNCaP-abl |
Coordinate | chr17:37787540-37788230 |
Target genes | | Number: 11 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| EWSR1-FLI1 | MA0149.1 | chr17:37787956-37787974 | GGAAGGGAGGAGAGAAGG | + | 6.61 | | ZNF263 | MA0528.1 | chr17:37787958-37787979 | AAGGGAGGAGAGAAGGGAAGG | + | 6.18 | | ZNF263 | MA0528.1 | chr17:37787961-37787982 | GGAGGAGAGAAGGGAAGGGGT | + | 6.42 |
|
| | Number of super-enhancer constituents: 8 | ID | Coordinate | Tissue/cell |
| SE_06536 | chr17:37787801-37791396 | Brain_Hippocampus_Middle | | SE_23360 | chr17:37787179-37790823 | Colon_Crypt_1 | | SE_23889 | chr17:37787421-37790638 | Colon_Crypt_2 | | SE_24890 | chr17:37787307-37791250 | Colon_Crypt_3 | | SE_33701 | chr17:37787663-37789866 | H2171 | | SE_50719 | chr17:37787213-37791262 | Sigmoid_Colon | | SE_52814 | chr17:37787218-37791328 | Small_Intestine | | SE_65910 | chr17:37787431-37790730 | Pancreatic_islets |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH17I039631 | chr17 | 37787241 | 37791254 |
|
Enhancer Sequence | CTTGGATTTG AAGGATCATA GGAATTTAAC AGGCAGGCAA GGGCATCCCA GGTCCAAGAA 60
GAGGGAAGAA GGTGTGCAAA GAGAAAGAGA TGCGAGTCAG AGGGGGACTT CTGGGCCAAC 120
CTGGAGGAGG CTTCGTTTCT AGTCAGGGAG CTGGGGAGAT ATACCTGAAG GACATAGGAG 180
GGCCTCTTCC TGACTAAGCC CTGTTGCCTA CCAACCCCCC ACCTCAACTC CTGCCTGGGG 240
CTCTTCCTGC CCGGCCAGCC CCCTCCGCTC CTGCGGAGGT TGGGAGGGAG AGCTACCGGA 300
AGAGTATGCT GGGAAGTGGT TCGGGGGAGG GTTTAATAAG TTCCCAGCAC CAGCCAAGGT 360
CAACAGGTAT ACCTGTCAGC CCACTTGCCA GGGTTGGGAA CAGAGAGGAG AGGCTGGGAA 420
GGGAGGAGAG AAGGGAAGGG GTTATTTTGC TTTCCCCAGG ACAGGAAAAT GAAGGGTCAG 480
AGCTGCAGCA AGTGGGCAGT GTGGCTCAGC ACCTGGAAGG ACCTCCCCAC CTAGAGGGGT 540
GTGTGGAAGG GCCCCAAAGC AGGCATGAGG GACAGAGTGT CATCTTCTCA GGAGAGAATT 600
TAAGAAATCC CTCTCCCTCC CACCTTGGGC TGGGTAGGGA GAGGCTGGGT GGATGTGAGG 660
GGAAGACCTG GCTCTTGACT GCAAGCATGG 690
|
