Tag | Content |
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EnhancerAtlas ID | HS120-02443 |
Organism | Homo sapiens |
Tissue/cell | LNCaP-abl |
Coordinate | chr16:57654050-57655060 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
TFCP2 | MA0145.3 | chr16:57654464-57654474 | AAACCGGTTT | + | 6.02 | TFCP2 | MA0145.3 | chr16:57654464-57654474 | AAACCGGTTT | - | 6.02 | TP53 | MA0106.3 | chr16:57654252-57654270 | AGCATGGCCGGGCATGCT | - | 6.02 | TP53 | MA0106.3 | chr16:57654252-57654270 | AGCATGGCCGGGCATGCT | + | 6.22 |
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| Number of super-enhancer constituents: 12 | ID | Coordinate | Tissue/cell |
SE_06138 | chr16:57654111-57683674 | Brain_Hippocampus_Middle | SE_24479 | chr16:57653161-57655304 | Colon_Crypt_2 | SE_27362 | chr16:57651492-57657990 | Esophagus | SE_29478 | chr16:57652478-57657696 | Fetal_Intestine_Large | SE_31472 | chr16:57651252-57658920 | Gastric | SE_33993 | chr16:57652485-57659094 | HCC1954 | SE_42020 | chr16:57652619-57655994 | LNCaP | SE_43207 | chr16:57653421-57656038 | Lung | SE_47718 | chr16:57652598-57655380 | Pancreas | SE_56894 | chr16:57652914-57656000 | VACO_400 | SE_58016 | chr16:57652580-57655967 | VACO_9m | SE_65275 | chr16:57649735-57674253 | Pancreatic_islets |
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Enhancer Sequence | AAGAGACGGG TGGGGGACAG GGGTGGGAAA GATAAGTAGG GTGCCACTGC CAGCCTGTCC 60 CCCTTGACCT TGGCCATCCC TCAGGTCTAG TTCAATGCCC TGAGAGTCCC GATGTGTGTG 120 GCCTGGCCCT TGGCCTGTTC AGGGTACTGG GCGTCTCTCA GTGGAGGCCC TGGCTGTTCT 180 GGGGTTACCC CTTGCAGTGC ACAGCATGGC CGGGCATGCT GGCATGGTGG TCATCCTAGC 240 ACCGGGAAGC TGGCAGGTGT GAGGTGTGTT CCCGGTGTCC AACGGACACT GCAGGACGCA 300 GGGCAAGGGT GACGCCGCGG AGCCTGAGCA TGGACGGGAG GCAGGCGGCA GGACCTGAAG 360 TCTCCTGCCT GCTTTCCGCA GCGCCCTGAG CAGCTTCCTC CTGGGATCCC ACGGAAACCG 420 GTTTGGGAGC AGGTTGGCCC AGGTCGTTTG ACTTTTGACT GGGGAGGAGA AGGCAGCCTC 480 CCTTAGCGAG CCAAATGGAA GGAACAGGGT GCAGGCCTGG GGGGGCGTGC CCAGCCAGCG 540 GCCAGCTGAG GGTCCCCTGC TCCCCCCAGC TGCCTGCACC CAGCATCACA GCCCTCCCTC 600 CCCTGGCTGC AAGAGGCAGG AGGAGAACTT CAAACGGTCC CTCCCTCCAC CGGCTGCTTG 660 TCTTCTCTGG GCCAGGCCCC TCCATGGTGG CTGAGGACTC TTTGGAACAG GGAACTGTCG 720 TGGAAGAAAG GGCCCGGCCC TGCCACTGCC TCCTGTGGGA CCCTGGGCCA GGCTCCCCTG 780 CTGTCCAGGC CTGTTTCCCT GTCTGTTCCA TGAAGGAGAG GCAGGGGCAG TGGTCTGTAA 840 ACCCATAAGC TGCAGCAGTA GGCCCCTCCC CTGGTCTCAT GGGCCACACA CGCCAGCCAG 900 CCAGAGGTGG GTGTCTGGAG TTGCGGGTGG GGTGCTGGCG CTGTGCCCTC TCTACCAACT 960 TGGCTCCCTG GGGCGTGTGG GCAGCAAATG GCACCCCCCA CATTCCCTCT 1010
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