EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS120-02363

Organism

Homo sapiens

Tissue/cell

LNCaP-abl

Coordinate

chr16:20752380-20752830

Target genes

Number: 7
Name	Ensembl ID

ACSM1	ENSG00000166743
THUMPD1	ENSG00000066654
AC004381.7	ENSG00000260510
AC004381.6	ENSG00000005189
LYRM1	ENSG00000102897
ERI2	ENSG00000196678
DCUN1D3	ENSG00000188215

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1	MA0050.2	chr16:20752569-20752590	AAAATAAAAATAAAAGTAATG	-	6.58
Klf12	MA0742.1	chr16:20752700-20752715	GGCCACGCCCCTACA	+	6.11
SP1	MA0079.4	chr16:20752698-20752713	GAGGCCACGCCCCTA	+	6.42
SP4	MA0685.1	chr16:20752698-20752715	GAGGCCACGCCCCTACA	+	6.46
ZNF263	MA0528.1	chr16:20752763-20752784	CCCTCCACCCTTCCCTCCTCC	-	8.51

dbSUPER

Number of super-enhancer constituents: 3
ID	Coordinate	Tissue/cell

SE_15070	chr16:20750956-20753949	CD4_Memory_Primary_7pool
SE_21226	chr16:20751041-20753821	CD8_Memory_7pool
SE_40211	chr16:20751149-20753818	K562

Enhancer Sequence

TTTAGGACTA CCCTGGGCCA AACAGTGAGA CCCCTTATCT ACAATTTACA AAACTTAGCC 60
GAGAGTGGTG GCGCGCACTC ATAGTCCCAG CTACTCTGGA GGCTGAGACA GGAGAAGTCG 120
AGGCTTCCCT GAGCTATCAT CACGCCACTG CACTCCAGCC TCGGCAACAG AGCGAGACCC 180
TGTCTCACAA AAATAAAAAT AAAAGTAATG GGAGCTACCG TGGTTACTGA TGGCAAGAAA 240
AGGTGCAAGC ACTTCAAGCA CAAAACCGAT AGCACCGAAG TCTGCGAGCG TCTCAGGACT 300
AGGGACGGAA ACGCCGGCGA GGCCACGCCC CTACAGCCGT CACGCCGACG ACCCGAGGCG 360
CGCATGCCCA TACCAGCAGC CATCCCTCCA CCCTTCCCTC CTCCCGCAAG GCCTGGCAGC 420
CGGCCCGCCC GCCCACCCCG GGACCGGTAC 450