| Tag | Content |
|---|
EnhancerAtlas ID | HS120-02361 |
Organism | Homo sapiens |
Tissue/cell | LNCaP-abl |
Coordinate | chr16:19440200-19441270 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Nr2f6(var.2) | MA0728.1 | chr16:19441101-19441116 | TGAACTCCTGACCTC | - | 6.22 | | RUNX1 | MA0002.2 | chr16:19440491-19440502 | AAACCACAGAC | - | 6.62 | | SPI1 | MA0080.4 | chr16:19441183-19441197 | AAGTTCCCCTTTTT | - | 6.2 |
|
| | Number of super-enhancer constituents: 3 | ID | Coordinate | Tissue/cell |
| SE_28214 | chr16:19440057-19445287 | Fetal_Intestine | | SE_29062 | chr16:19440091-19445395 | Fetal_Intestine_Large | | SE_53058 | chr16:19440012-19442182 | Small_Intestine |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH16I019428 | chr16 | 19440108 | 19445287 |
|
Enhancer Sequence | GCAGTGGCAT GATCTCGGCT TACTGCAACC TCCGCCTTCC AGGTTCAAGC AATTCCTGTG 60
CCTCAGCCTC CCAAGTAGTT GGGATTACAG GTGCGAGCCA CCACGCCTGG CTCATTTTCT 120
TATTTTTAGT AGAGATGGGT TTTCGCCATG TTAGTCAGGC TGGTCTCCAA TTCCTGGCCT 180
CAAGTGATCT GCCCATCTCA GCCTCCCAAA GTGCTGGGAT TACAGGCATG AGCCACCATG 240
CCCGACCAGT ATTTTTATTT TCCTATTCAT AGGTTTGATC TTGCTGTCTT GAAACCACAG 300
ACCTTATTTT CTAAGCATAG GCCTCATTTT CTTAGGCTCC AAGGAGTCTA AGTGTATGGC 360
TGTGAATGTG CCTGACACTC TGAAAAGCCA ACATGGATCT CAATACTAAC AAATGTTTAT 420
TTACAGGAAG GCTTTGTTAA TTGAGTGATG GAAGCTATTG CTCTCACTTG CTATTTAGAG 480
ACTATTGACA TTACCTTTAT TTCCTGGTCC TAAACATTAC ACACTGCAGA TAAAGGAGTT 540
CCTGGCATTT ATTTGTCATG GCATCGAGGC TGACAGCCAA AGTAATCATT ACACTAATAC 600
ACATTCCCAG AAAGAGCAAT CAAGAGCAGG CAAGCAAACG AAATCAATGT CTCTGCTGAA 660
ATGTGCCTGT GTGTGAGCGT CCCATGACCT GGTGCTCTGG CAACCACTCG TCCATGTGTG 720
GGGGCCATCA TCCTTGTGTT GGAGTTGTCT GTCCAAGATC AGGTGCCTGC AAAAAGAATG 780
GGAGCTTCCA GAACCGCTAA TGTGAAACTT TGGTTGAAAT GAGGTGCCTG GGAATGAGCG 840
ATTTCTTCTT TTTTAAATTC TTTTTCATAG CCTTTCAAGA ATTTTTAGAA TTAGCCAGTC 900
TTGAACTCCT GACCTCAGGT GATCCACCTG CCTCGGCCTC CCAAAGTACT GGGATTACGG 960
CGGGAATCAC TGTGCCTGGC CCAAAGTTCC CCTTTTTATA AGGACACCAG TCATGTTGCA 1020
TTAGGTCCCA CCCCAGTGAA CTTATTTTAA CTTGATTACC TCCACCGAGA 1070
|
