| Tag | Content |
|---|
EnhancerAtlas ID | HS120-01671 |
Organism | Homo sapiens |
Tissue/cell | LNCaP-abl |
Coordinate | chr12:133404260-133404910 |
Target genes | | Number: 20 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| RREB1 | MA0073.1 | chr12:133404774-133404794 | ACCCCACCCAACCACCGCCC | + | 7.08 | | TFAP2A | MA0003.3 | chr12:133404670-133404681 | TGCCTGAGGCG | - | 6.62 |
|
| | Number of super-enhancer constituents: 4 | ID | Coordinate | Tissue/cell |
| SE_23662 | chr12:133402840-133404482 | Colon_Crypt_1 | | SE_23662 | chr12:133404488-133406233 | Colon_Crypt_1 | | SE_25141 | chr12:133403817-133406393 | Colon_Crypt_3 | | SE_31258 | chr12:133404404-133406511 | Fetal_Thymus |
|
Enhancer Sequence | AGATGATTTA TTTCCTTCTT GCCATTTAAG GTATACTGCC TGAAAAGATA TTAAAGGGTT 60
ATAAAGCGCT ATGTTGATGT CGTTTAAAAG ACAGTTCAAA ATAATCCACG ACGACGGGTG 120
TGGCTGCTCA CACCTGTAAC ACCAGCACTT TGGGAGGCTG GGGTGGGAGG ATCGCTTGAG 180
GCCAGGAGTT CCACACCAGC CTGGGCAATA CAGCAACACA CCCAGTCTCT TAAAAAAAAA 240
AAAAAAATCC ATGAGTCATC TGTAAATGGC TTACACTGGC CCAGTGACAA TAAACTCCAA 300
CCTCTTAAGA ATCCAGCACC TGCCTACACC AACATCCTTA CCGCCATCGC TTTCCCCCTT 360
TGCCATTACA CTGTGGCCAC ATCCTCCGCC CTCAGGGTCT TCAAACTTTC TGCCTGAGGC 420
GCGCTTTTCT CACAATTTTG CCTGGCTTGC TTCTCGTCAT AGAGGCCTTA GCACGGAAGT 480
CGCCCGCCCC CCAGGCTCCC ACTTAGAGTA GCGGACCCCA CCCAACCACC GCCCGGTACC 540
CTCTCGCTGG CGACCCTGGG TGTCCCTGTC CTAGGTGGGC TCCGCGGGGG CAGTGACCCA 600
GACCCACAAT ACCCAGGACC CGCCACACGA CTGACATTCG TCGGGTTCAT 650
|
