EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS120-01656 
Organism
Homo sapiens 
Tissue/cell
LNCaP-abl 
Coordinate
chr12:125001680-125004060 
Target genes
Number: 3             
NameEnsembl ID
SNPs
Number: 1             
IDChromosomePositionGenome Version
rs150954431chr12125002323hg19
TF binding sites/motifs
Number: 4             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
IRF1MA0050.2chr12:125002750-125002771AAAAAAAAAGAAAAAGAAAAA-6.09
PAX5MA0014.3chr12:125003554-125003566AAGCGTGACCCC+6.74
TFAP2CMA0524.2chr12:125002132-125002144AGCCCCAGGGCA+6.11
ZfxMA0146.2chr12:125003445-125003459CAGGCCTCGGCCCA-6.46
Number of super-enhancer constituents: 33             
IDCoordinateTissue/cell
SE_00892chr12:125000422-125005921Adrenal_Gland
SE_02516chr12:125001124-125005150Astrocytes
SE_03150chr12:125001091-125004656Brain_Angular_Gyrus
SE_03868chr12:124999947-125005183Brain_Anterior_Caudate
SE_04770chr12:124999782-125006020Brain_Cingulate_Gyrus
SE_05769chr12:124961737-125006415Brain_Hippocampus_Middle
SE_06714chr12:124999644-125006263Brain_Hippocampus_Middle_150
SE_07720chr12:124999423-125006456Brain_Inferior_Temporal_Lobe
SE_24308chr12:125001402-125004713Colon_Crypt_2
SE_26686chr12:125000312-125006128Esophagus
SE_29559chr12:124999923-125006130Fetal_Muscle
SE_31736chr12:125000286-125006016Gastric
SE_33571chr12:125000372-125004779H2171
SE_37047chr12:124999543-125014951HSMMtube
SE_38512chr12:125000941-125006425HUVEC
SE_40963chr12:124999841-125005921Left_Ventricle
SE_41606chr12:124999991-125006064LNCaP
SE_42235chr12:124999907-125006334Lung
SE_44409chr12:125001085-125005277NHDF-Ad
SE_46492chr12:125001061-125005659Osteoblasts
SE_46647chr12:125000991-125005920Ovary
SE_47217chr12:125000108-125005999Panc1
SE_47496chr12:125000324-125005536Pancreas
SE_48854chr12:125000000-125005706Right_Atrium
SE_50804chr12:125000571-125006101Sigmoid_Colon
SE_51853chr12:125000968-125005029Skeletal_Muscle_Myoblast
SE_54357chr12:125001265-125005243Spleen
SE_54715chr12:125000491-125006280Stomach_Smooth_Muscle
SE_57224chr12:125001037-125004665VACO_400
SE_63641chr12:125000392-125005029HSMM
SE_65244chr12:124983419-125006731Pancreatic_islets
SE_67094chr12:125000372-125004779H2171
SE_68676chr12:124991908-125006053H9
Enhancer Sequence
GAAACTGAGG TCTGCAAAGG GGAGGCAACA CGCCCAAGGT CACACAGCAT AGAGAGGACG 60
GAGCCAGGAC TCAAACCCAG GTCTGTGGCA AAGGAGCAAC ATTGCCTGGA AGCCCAGCCC 120
CCTCCCTTCC CCAGCCTGGG CTCAGAGGTC CCCAGGAGCC ATTCCCGCCA CCTCCCTATG 180
GCCGCGGCGC ACCCAGACCT CAGGACAAAT CACTCCCTCA TCCCCCCGGT TTGCAACTAA 240
AGGCTCCTTG TGAGCTCGGG AAGCCCTTCC AACTTTCCAG TGTTTATCCC GGCTCCTCGC 300
TGCCAAGTCC CTGGGCAAGC CTGGGCCGGT GGCGCTGATT TCAAACCAGA CATGGGCACC 360
GAGCCAAGCG CCACCTCGGT GGGGAGCCGG GCGCCGGGGC CGGGCTGCAG CGCTGCCTGC 420
ACCTGGCTCT CCCCTGCCTG AGCCCACCGC GGAGCCCCAG GGCAGAGCCT CGGGAGCGCC 480
CACGATCACA TGCCCTCCTG AAGTCAACTC CGGGAACAGA AGCCCCCTGA GCCCCCAAGG 540
CTCGCCATGC TCCCCCCCAG GGACGCCGGA TGTGCACCAA GGAGAGGAGC ACAGTGCCCA 600
CCCGGGTCCC CTCCCACGCG GGCCGGCCAA GAAGCCTCAC CCCGGCCTGC CCGGCCAGCG 660
CCTCCGAGCG CTCTTTTCCG TGACTGCAGC AACTTCGTCC GATGAGACAG CCCTGCCCAC 720
CATCCCGCTG AGCTCAGGGC CGACAACACT GCGCTGCCAG GGGAGGGTCC AGCTGCCCCC 780
ATTGGCTGAC CTGCGGCCGG CCACTCAGCC CCCAGCCCTG GCCACCACCT CCAGCGACAG 840
AACTGGGGCT CTTTCCAGAT GAATTCCTCG GCCCCCAATC AGCGCCCCTG CATAGAGCCT 900
GCAGGCCACA GCCCCCCACC CCAGTCTGCG CCCACCTCCC CCGGCCGGGG TGACCCAGCC 960
ACACTGCACC TCCCTGCCCA CTCCAAGCCC GGCGACTTCT CTTACCCGAG CACATGACCA 1020
ACCTCGCTCA CGTCAGCTCC AAACACAACT TGAAGTAACT CTCTCACAAG AAAAAAAAAG 1080
AAAAAGAAAA AAAGTGCCAG CCAGCGGGCC AGCAGAGTCC ACACACACAG GCTGTGCTGC 1140
CGGCTTCCAG GAGGCACACC ACAGCCAACA TCAGACCCAT CCTTCCTCCA GGATGACACC 1200
CGCAGAGGGG CGGCCCCAGA GGGCGGCCTC ACCTTCCCGC GAGACTACGA CTCCCATCCC 1260
GGCCCTGGAG GCCCTGCAGG GCCAGGCCAG GCCCCCCAGG CTCCCAGCCC GATGCCCCCC 1320
AAACCCGGGC AGGCCAAGGC CCACCGGCGA CAAGTGCGGG GCCGCCTGAC CCCACGGCTG 1380
GGCCGTGAAC GAGACGTCGG GCCTCCAGCG ATCCGTTCTC GCCTCTGCCA CTCTGGGCCT 1440
ATAAACACAG GGAATTACAT AAGTCCACTC CTCTTGTTTG GAAGCCAAAA GTACGAGCTT 1500
TTTCTCCCAG CCTTGGCAGT AAGTAATAAT TCCTCATCGC CATGGTAACC CTGGCGGGCT 1560
TCCAGCCGAC ACTCGGGAGC TGAAACACTG TGAGGCCTTT TTATAGCTCG GCTCTTCGCT 1620
CGCTGGCAGG CGAAAGAGAG CTCCAGCCCC GCTTCTCCCA CTTTAACCCG CTTCCTCCCA 1680
GCCCGGACTG TCCAGCTTCG AGCCGCACCT GCACCTCCAA CCTGAGCGTA GCTCTGGCGC 1740
CTTGGCTCCG GCCTGGTTCC GAACCCAGGC CTCGGCCCAT CCCTCCCCCG TCCTCTGTCC 1800
CGAGGGCCAG ATGGCCAGAG GAGCAGGCTC TCCCTTGCAA ATATTTCTGT CCTCCTTTTA 1860
ATCCTAGGAA AAGAAAGCGT GACCCCCTCA CACTGGCATT CTGATCTGGG GTCATCTCGG 1920
TGACAGGCCT AGAAAAGAAG ACGTGGCCAA ATAATACACA CACACACACA CACACACACA 1980
CACACACACA CACACACAGG CCAACAATGA TGGCTTGGTA GTCAGCCAGG AGTCTGAACC 2040
TTGGCTGCAA TTAGCTGTGT GACTCAGAGA CAAGTCTGAG CTTCTCTGGG TGTCAACTTT 2100
CCATCCGTAG AAGGGGCAGG CTGAGCTCTG CTTCTCCAAG TGCTCTGGAA AGCAGAGATG 2160
AGGCGCCAGA GGAAGCTGCT GGAGCTCCCA GGAGGCAGAG GAGGCTCCAC CAGGGTCTCC 2220
AGATTCACTT CCCTGCCCCT AGCAGCCAAG AGTTGGGCCT AAGAATGTGT CCCTGGACAG 2280
CAGCCCACAT GATGACAAGG GTCTGGGGGT GCAGATGTGA GGAAGGCACC CCTGGCAGAA 2340
GCATGGCAGA TGTGAAGGTC TGGAGGCTGG ACCACGCGGG 2380