| Tag | Content |
|---|
EnhancerAtlas ID | HS120-01609 |
Organism | Homo sapiens |
Tissue/cell | LNCaP-abl |
Coordinate | chr12:120538310-120539940 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr12:120539302-120539323 | ATGCAGTTTCAGTTTCTCTCT | + | 7.22 | | IRF9 | MA0653.1 | chr12:120539306-120539321 | AGTTTCAGTTTCTCT | - | 6.28 |
|
| | Number of super-enhancer constituents: 4 | ID | Coordinate | Tissue/cell |
| SE_27057 | chr12:120537449-120541185 | Esophagus | | SE_31982 | chr12:120538202-120540645 | Gastric | | SE_41982 | chr12:120537882-120541422 | LNCaP | | SE_68937 | chr12:120538843-120541016 | H9 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH12I120099 | chr12 | 120536948 | 120540903 |
|
Enhancer Sequence | ATCTGTGGTC CCAGACAGAG GTGGTGGAAG GAAACCAACA GGCAGCTTAG GGGCAGCCCT 60
GAGCATCTTC CCTGATGCTG CAGAGCCAGA GCTCCTGCCC AGCCCTGGGA CAAAGCCCAA 120
CCTGCCCCTG CCACCGCCCC TGCCCCATCC TTGCTCCATC CTCAACACGA CCGCTGGGAT 180
CTCTTCCCAG GGCTTCATTC TGCCCACAGC TTTGCTTCCA GGGCAGCGTC GCTCCTTGGC 240
TTCGGGGTAG CTGTGACGAT CAAGCTCTCT TGGCACTGGG CCCAAGAACT AGCTCTGGCC 300
TTGGCAGCTG CTGCTGAGAG CGCCGGGTCA GCACATGGCA TGGTGTGTCA GACGCCTTCC 360
AGAGCGAGGG CGCGCCGGAG CCACAGGAAC AGGCGACTGT CCCCTGCCAG CAGAGGAAGC 420
CCAAGGAGCG GATGGCTCTG CAGACTCTCC TTTGCTGAAG ATGATCAGAG ATGCCAAGAA 480
ACGCCTGCAG CCATGGCCCC GGCGCACAGC CCCCGCGGCT CCCTGGGCGC CTCTGCCTCA 540
TCCGGGGCCC AGGAAAGGGG CTTTATCTGA GAGCAGAGAA TTTGTCTGGG GATGAAGTCA 600
GGGGCTCAGA GCTCTGGCTA GGAGGAACCG GAGCACCGAC GTTTCCCATG GCCACCAGGA 660
ATCACCTTCA CTCACAGGGA CTCTGCTCTA GGCCAGGCAC AGAGCTGGGG GCTTGGTATC 720
CATTACCTTA TTAATGTCTG CAGCCACCTG ATCCAGCAGA CCTCAGGATG GCCATGTGAC 780
CAGCAAGGAC GTGAGGCTGA GTGCAGCGGC CAGCTGGAAG TCCTGGCGCC CAGGGCTGAC 840
TCCCAGGCCC AACGCCAGGG CCTTGCCTTC CTTGTCACTT CTCCCCTCAC CTCCATCCCA 900
CCCGCACCTC TCAGGGCCGG CAAACCTCAG CTTCTGAGAG CAAGAACCCG AGAAGGGGTG 960
ACCACAAGGC TTTTTCTCGC CAGGCTAACA GGATGCAGTT TCAGTTTCTC TCTGAACGCC 1020
CTGCATCGGA AAAAAGTCAC GCTACTGCAT CCTGACTGCC CTATTCCTGA AAACTCCTCA 1080
CCTCCCCAAA ACTCCTTCCT TCTTTGCCAG TGACCATCAA AGGGCGTCGA GACTTCCAGT 1140
GGCCCCTCAG GGCGCCCTGC TGGGCCTCCT GCCTCATGAG GGCCAGAGCG GGACTCTAAG 1200
ATGGAGCCAC CTGTCTGCTT CCCCAGACAC GTGGGACGGC AGCAGGGGCC CAGCCGCTGC 1260
CCACAGGCCG CCCCTTCCCA AGCCCCTGGG GAAAAACCCA TGTTGCTCCC AGGAAGCTGA 1320
GTGACTCCTC CCCGCCTCCC CACGGAATGG AGGAACCAGT TCACCTTCTT CCCGCTCTGC 1380
CCAGCCCAGA AAGCAGCTGA CTGCATGATG GCAGGGAGGG GCTGTGGCTC CTCCTGCTGA 1440
AAGAGCCTCG GACCCCCCAG GCCCCACTGC CCTGCCCAGG AGTTCATTCC TCATGGCCAC 1500
GGGCCTCTGA ACCTCTGCCA CCCTGAACCT CCGCCTGGTT TTAAGGCACA GGACGGGGCA 1560
GGAAGGCAGG GGCGCCACCT GCCCAGTCGA TGCAGGGCCT CGGCAGACTC AGGGCCAACC 1620
CTGAGTGCCC 1630
|
