EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS120-01491

Organism

Homo sapiens

Tissue/cell

LNCaP-abl

Coordinate

chr12:56693010-56693940

Target genes

Number: 36
Name	Ensembl ID

GSTP1P1	ENSG00000257569
DGKA	ENSG00000065357
WIBG	ENSG00000170473
CDK2	ENSG00000123374
RAB5B	ENSG00000111540
RP11	ENSG00000237493
AC034102.1	ENSG00000255990
SUOX	ENSG00000139531
IKZF4	ENSG00000123411
RPS26	ENSG00000197728
ERBB3	ENSG00000065361
PA2G4	ENSG00000170515
RPL41	ENSG00000229117
ZC3H10	ENSG00000135482
ESYT1	ENSG00000139641
MYL6B	ENSG00000196465
MYL6	ENSG00000092841
ANKRD52	ENSG00000139645
COQ10A	ENSG00000135469
CS	ENSG00000062485
CNPY2	ENSG00000257727
PAN2	ENSG00000135473
IL23A	ENSG00000110944
RNU7	ENSG00000252206
STAT2	ENSG00000170581
APOF	ENSG00000175336
TIMELESS	ENSG00000111602
SPRYD4	ENSG00000176422
MIP	ENSG00000135517
GLS2	ENSG00000135423
RBMS2	ENSG00000076067
BAZ2A	ENSG00000076108
SNORD59A	ENSG00000207031
ATP5B	ENSG00000110955
AC117378.1	ENSG00000241217
PTGES3	ENSG00000110958

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

MITF	MA0620.2	chr12:56693198-56693216	GACGGTCATGTGACCTTG	+	6.14
MITF	MA0620.2	chr12:56693198-56693216	GACGGTCATGTGACCTTG	-	6.14

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

SE_35652

chr12:56692597-56696748

HepG2

Enhancer Sequence

CTAAAAGGGC CAAGTTACTT AGAACTAAAA GTACTGCAAT TTGAAATTGA AGGCATCATT 60
ACCTGCAACA GTATTTCTAT GTCCCAAAAG GCAATCAATA CCAAGTAAAG GACCCCAAAG 120
AAGGAGAGAA AGTTCCTGGA TAAAGTAGAC TTAAGATCAA CGGCATAACC TGGGTAAGCA 180
AGTAGTATGA CGGTCATGTG ACCTTGGCAT TAGTATCTCT TGCCGAGGAT CTTCATTTAT 240
TGGCTTGCAG TTTGGTGGAA ACACCTTTCT GGTTCTTTCT GCAATCATGT ATGATAGTCA 300
TGCAGGAGGT TGTACAGAAG TGCTCCACCC CACCCAAGCT CCTCCTATAT AAAAAGTGCA 360
AGAGTCCCAA GGACAAAGAG GAGGGCCTGA AGGACCCACT CTTGTGCTCG GCGTGGTCAC 420
CGAAGGCTTA AATAATAGGC TTGGAGAAAT GGAAACAGGC AGTTCGGGAA CTGACAAGGC 480
CCTTCCTACA AAGCAGAGGA CGAAATTAGC CACTGCTCCA GAGTGAGCAC ATATCTTCAC 540
TCCCGCTCCC TCCACCAAAC TGACTGTAAC TCCAGTGGAA CACCACATCT CTAGTCTCTA 600
CCAGAGGTTC CTGTCTCGGC TCCTTGCTAT TTCAGGGCCA CGCATCCCTT CCCCTTTCAT 660
TTCAGACATG CGGGGTGACA GCAGGGTCGG CCTCCTCACG CGTTCTGGAC TGCGGGCCGA 720
GGGCGGGCGG CGTGCACTTC ACCCCCAGGA GCCAGAAGGG AAGCGCGGCA CATGGTCCTG 780
TAGCTTCACG CAGGGCTGGC GGCCAGCCAA GCGCAGGGCC CTTTAAGGCG CGCAGGGTGC 840
GCACGGGTGT GGGAGGGAGA CCCCGGCGCC GGAGGGCCTG CGGTCGCCTC AGCCCCACCC 900
TGGGACGGCG TGCTCCCTCC CCTCGCTGCT 930