| Tag | Content |
|---|
EnhancerAtlas ID | HS120-01486 |
Organism | Homo sapiens |
Tissue/cell | LNCaP-abl |
Coordinate | chr12:56474170-56475010 |
Target genes | | Number: 45 | Name | Ensembl ID |
|
SNPs | | Number: 2 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Foxo1 | MA0480.1 | chr12:56474488-56474499 | TGTAAACAGGA | - | 6.62 |
|
| | Number of super-enhancer constituents: 8 | ID | Coordinate | Tissue/cell |
| SE_07629 | chr12:56472009-56479657 | Brain_Hippocampus_Middle_150 | | SE_23624 | chr12:56472516-56478145 | Colon_Crypt_1 | | SE_27988 | chr12:56472169-56478232 | Fetal_Intestine | | SE_28993 | chr12:56472036-56478358 | Fetal_Intestine_Large | | SE_31786 | chr12:56472465-56478174 | Gastric | | SE_48005 | chr12:56472791-56476490 | Pancreas | | SE_50964 | chr12:56472347-56478225 | Sigmoid_Colon | | SE_57075 | chr12:56472823-56476584 | VACO_400 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 2 | Chromosome | Start | End |
| chr12 | 56474601 | 56474862 | | chr12 | 56474518 | 56475000 |
|
Enhancer Sequence | GTGGCGCGAG AGCACCGGCG GGCTCGGCAC CTGGGAGCCG GAACCCAGTG CGCGCAGCCT 60
CGGAGGGTAT GGGCACGGTC TCAGGCGGCG CGGGGTTGTG GGTGCTGCCC CCGGTTTGCC 120
AGGACCACCT GGGAGAGGGG CGGTCAGGCT CGGGTTATCG GCGTGGTCCG GCCGAGGGCG 180
GCATTCCGGG ACCCTCACGC CACCCTTCTC CAGAGCGTCG CCGACCCTCT AATTGGTCTC 240
CCCAGAAGAG GCTGAGGCCG AAACAGTAGT TCACACTTCT GAGGGGCCCT GCAGGGAGGG 300
GAGCAGGGAA CTTCATTCTG TAAACAGGAG GTGCTTGGAG GTGGGGGCCT TGGCGGGAAG 360
GGTCTCGGTT TGCTCGCCAA CCCCCTGCCC CCCACCCGCG CCGATTTCAG CTACCCCTAG 420
TTTCGTTGTT TTGCCGACAG GGCGGAGCTA CAGAAGGTTG GAGGGGGTTG TTGTTCTCTG 480
GTGTTGGAAA AACAGGAGCG GCACCTCCTC TTCCGTGAGT GAGCCTGCCC TGGGGAGGTC 540
TGAGATTAAC CAGAGGGCCA AGTTCAGGTG ACATCAGGCA GGAGGCCCAA CAGAGGCTGG 600
CGCCCCCTTT CCTCAGTATA GCAGAGCTTA AGCAACATCT CTTTGTCAAG ACCCAGGTCA 660
ACACAACTCA TATTTATTGA GCATCTACTA TACACAAGGC CCTGGGCCAG GAGCTGTAAG 720
GGCAAGGATG TCCAGCCTCT GGTCTTTTCT CTCCCCAACC TGAGGATCAA GAGGGCACCT 780
CTGCTACTTT CTAAGCCTCC TGCCTTGGGG AGTCCTTCCT GGGCTCAGCT TGTGCCTCCC 840
|
