| Tag | Content |
|---|
EnhancerAtlas ID | HS120-01380 |
Organism | Homo sapiens |
Tissue/cell | LNCaP-abl |
Coordinate | chr12:6472310-6472600 |
Target genes | | Number: 21 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| KLF5 | MA0599.1 | chr12:6472572-6472582 | GGGGCGGGGC | - | 6.02 | | SP1 | MA0079.4 | chr12:6472547-6472562 | GGTGGGCGGGGCCAG | - | 6.51 | | SP3 | MA0746.2 | chr12:6472547-6472560 | GGTGGGCGGGGCC | - | 6.14 | | SP4 | MA0685.1 | chr12:6472545-6472562 | TGGGTGGGCGGGGCCAG | - | 6.5 |
|
| | Number of super-enhancer constituents: 13 | ID | Coordinate | Tissue/cell |
| SE_00073 | chr12:6472108-6473866 | Adipose_Nuclei | | SE_00937 | chr12:6472410-6473577 | Adrenal_Gland | | SE_24888 | chr12:6472160-6473577 | Colon_Crypt_3 | | SE_27628 | chr12:6468085-6473790 | Fetal_Intestine | | SE_33896 | chr12:6472562-6473748 | HCC1954 | | SE_34285 | chr12:6472179-6474179 | HCT-116 | | SE_34863 | chr12:6469290-6474161 | HeLa | | SE_41073 | chr12:6472311-6473679 | Left_Ventricle | | SE_41677 | chr12:6472569-6473476 | LNCaP | | SE_47976 | chr12:6472519-6473480 | Pancreas | | SE_48759 | chr12:6472429-6473539 | Right_Atrium | | SE_51350 | chr12:6472152-6473836 | Skeletal_Muscle | | SE_68835 | chr12:6472350-6473447 | H9 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
Enhancer Sequence | AATAATAATA ATAATAAAAG TTCATTTTCC ATAATAAATT TGACTTCCTA CCCCTGAAAT 60
GCTTCTACAT AGGACCCCAG GGAGGAGGCC CCAAAAGCTT GGGCACCAAG AGGTGTTATT 120
TTAATTATCT AGTTATTATT TGTATTTATT TACTTTTTTT TTTGCCCGCG AGCCCACGAG 180
GCCCCGCGTG GTGTCACTGG GCTGCGCGGG CGGGTCAGGA AAGGAGCGGA GCCCATGGGT 240
GGGCGGGGCC AGGGGCCGGC GAGGGGCGGG GCGGGCCCCT CGGCGCTGCG 290
|
