| Tag | Content |
|---|
EnhancerAtlas ID | HS120-01323 |
Organism | Homo sapiens |
Tissue/cell | LNCaP-abl |
Coordinate | chr11:117777750-117778500 |
Target genes | |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| EGR1 | MA0162.3 | chr11:117778070-117778084 | GCTGCGTGGGCGTG | - | 6.15 | | EGR2 | MA0472.2 | chr11:117778072-117778083 | TGCGTGGGCGT | - | 6.62 | | EGR3 | MA0732.1 | chr11:117778070-117778085 | GCTGCGTGGGCGTGG | - | 6.32 | | SP8 | MA0747.1 | chr11:117778022-117778034 | GGTGGGCGTGTC | - | 6.02 |
|
| | Number of super-enhancer constituents: 4 | ID | Coordinate | Tissue/cell |
| SE_25531 | chr11:117777916-117780553 | DND41 | | SE_53890 | chr11:117777987-117778840 | Spleen | | SE_59013 | chr11:117768550-117824927 | Ly3 | | SE_61192 | chr11:117757750-117831515 | HBL1 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH11I117906 | chr11 | 117777561 | 117781639 |
|
Enhancer Sequence | TGAAAAGCAT ACGCAATGTG AGAATAGCTT TCATTCGCTT TTAGAAATTA TTTAGTTTTG 60
GAATTCCAAA TAATATTAAG GGGTGGAGGG TGGGTGGGAG GTAAGATTTG GATGTTTAGC 120
CAAATACAGC CTGGGTTTGA CAAGGTGAGA AGGCCTGCTC TGGTCCTGCA GTCTGTGCCC 180
TTCTTGTGTG CTGAGCGGCA GGGCAGGAGG TAGCGGGCAT CCCTCACCTC AGCCCTGGAC 240
TCCACAGACA AGGATGGAGT TTCAGAAAGG CTGGTGGGCG TGTCGTGTCG TGTCGGGGCG 300
TGGCTACGAG TGGGTGTGAC GCTGCGTGGG CGTGGTTCTG GGCTAGCGCT GCCCAACCGA 360
GCTCTACCCA GGGATCCTCC TCCTCACCCC ACTCTGATGA TCTAACTGCT CTGACTCATG 420
ATAGACACCG CCTCCATAAT TAATGTGCGA GGAAACACCA GCTCACAGGC TCAGAGCACG 480
AGAATGGCTG GACTAACCAG AGAGTCCTCC GAGGCTTCCA GAAATCCCGG TACTCCTCCT 540
CCCTCTCCCA CCTTTACAGA TGCTTATGCC AGAGGGCTCT GGCTCCATTC TTCAGGGTCC 600
TCCCTGAGCC CCCATTACCT GTCTTCTCCA ATCTTTTCGG GACCCACCTT GGCTATCCTT 660
CCTCTGCTGA GCTTCCCCTA GCCTGCCAGG ATGATTAGTT GCTCCCGCCT ATGCCACCAT 720
AGCTCCCTGC TCCCCGAAAA CATCGTATAA 750
|
