EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS120-01213

Organism

Homo sapiens

Tissue/cell

LNCaP-abl

Coordinate

chr11:66824510-66824950

Target genes

Number: 29
Name	Ensembl ID

MRPL11	ENSG00000174547
ZDHHC24	ENSG00000174165
CCS	ENSG00000173992
U4	ENSG00000199325
RBM14	ENSG00000239306
RBM4	ENSG00000173933
RP11	ENSG00000258297
RBM4B	ENSG00000173914
SPTBN2	ENSG00000173898
C11orf80	ENSG00000173715
RCE1	ENSG00000173653
LRFN4	ENSG00000173621
SYT12	ENSG00000173227
RHOD	ENSG00000173156
KDM2A	ENSG00000173120
POLD4	ENSG00000175482
AP003419.11	ENSG00000256514
RAD9A	ENSG00000172613
U6	ENSG00000253024
TBC1D10C	ENSG00000175463
PPP1CA	ENSG00000172531
RPS6KB2	ENSG00000175634
AP003419.16	ENSG00000255949
PTPRCAP	ENSG00000213402
CORO1B	ENSG00000172725
TMEM134	ENSG00000172663
AIP	ENSG00000110711
CDK2AP2	ENSG00000167797
NDUFV1	ENSG00000167792

dbSUPER

Number of super-enhancer constituents: 4
ID	Coordinate	Tissue/cell

SE_27125	chr11:66821158-66825525	Esophagus
SE_36893	chr11:66821179-66825656	HMEC
SE_57806	chr11:66823252-66825441	VACO_503
SE_58231	chr11:66823308-66824848	VACO_9m

Enhancer Sequence

TGCCCCGCGC CTCCGCCTCG CCCGGTTCCG CTCGCGCGCC CGGGTGTACA GGTCCGTGCC 60
GGAGCGGCCC AGGCTGTGCG CCTAACCCGG CCTCCGAGGG GTGTCCCAGC GGGGCCTGGG 120
GTCCAGGGCA GAGTTCTTCC GCCCCAGCCA TTGGGAATGA AGGCCTCAGT GATGTTATCT 180
GTAAAGCCGG AGGAATGGCA TCCACCGGGG AGAGGTGTCA CAAGGACTGA GTGAGGCGAC 240
CTGGGTGCAC ACAAGATCCT AAGACAGCAC TTGGCCACAC AATTCCGCTG AGGGCCTGAG 300
AGCTTGGAAG CCAGACTGCC GAGGTTCAAA TTATGGCTTT GCCTCTTATA GCTGTGTGCC 360
CTTGGGTAAG TCCCCTAACC CTGCTGTGCC TGTGTCCCTC ACTACATCAC AGGTGAGTGA 420
CAGTGCCCAC CACACAGGGT 440