| Tag | Content |
|---|
EnhancerAtlas ID | HS120-00778 |
Organism | Homo sapiens |
Tissue/cell | LNCaP-abl |
Coordinate | chr10:27528860-27529240 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr10:27529176-27529197 | AACCAGAAAGTGAAAGGGGGC | - | 6.15 | | Nr2f6(var.2) | MA0728.1 | chr10:27528895-27528910 | TGAACTCCTGACCTC | - | 6.22 |
|
| | Number of super-enhancer constituents: 11 | ID | Coordinate | Tissue/cell |
| SE_15388 | chr10:27528473-27533249 | CD4_Memory_Primary_7pool | | SE_22940 | chr10:27528538-27533404 | CD8_primiary | | SE_28325 | chr10:27528113-27533145 | Fetal_Intestine | | SE_29451 | chr10:27528123-27533154 | Fetal_Intestine_Large | | SE_30400 | chr10:27528642-27532718 | Fetal_Muscle | | SE_32416 | chr10:27528543-27532626 | Gastric | | SE_43167 | chr10:27528517-27532812 | Lung | | SE_50992 | chr10:27528866-27533053 | Sigmoid_Colon | | SE_53227 | chr10:27528482-27532976 | Small_Intestine | | SE_53830 | chr10:27528527-27532905 | Spleen | | SE_55535 | chr10:27528917-27532656 | Thymus |
|
Enhancer Sequence | GAGACGGGGT TTCACCATAT TGGTCAGGCT GGTCTTGAAC TCCTGACCTC AGGTGATCCA 60
TCCACCTCGG CCTCCCAAAG TGTTGGGATT ACAGGCTTGA GCCACCGCGC CCGGCCCGGA 120
TTTATTTTTT AACACACCCA AATCCGCAGT CATTAAGTGA CAAGACTTTT GTTTTCAACA 180
ATATGAAGTA CTTAAAATCT GGATATTAGA TTTTTCTCCG GTTTGGAAGA TCAAAAGGTA 240
ATTAATTCAT ATTCAATAGC TCCCCTTCCA CTACATGGCT CCTACACAGA AAAAAAGGCT 300
AAATAAACAA CACTAGAACC AGAAAGTGAA AGGGGGCTTT GGGGCTCTCT GCAGGAGGCG 360
TCTACAGCCG GGGCCCAGCG 380
|
