| Tag | Content |
|---|
EnhancerAtlas ID | HS120-00771 |
Organism | Homo sapiens |
Tissue/cell | LNCaP-abl |
Coordinate | chr10:22904540-22905430 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Gata1 | MA0035.3 | chr10:22905346-22905357 | ACAGATAAGGA | - | 6.14 |
|
| | Number of super-enhancer constituents: 24 | ID | Coordinate | Tissue/cell |
| SE_03224 | chr10:22900683-22904908 | Brain_Angular_Gyrus | | SE_03224 | chr10:22904985-22907174 | Brain_Angular_Gyrus | | SE_03934 | chr10:22898558-22908290 | Brain_Anterior_Caudate | | SE_04774 | chr10:22891981-22927158 | Brain_Cingulate_Gyrus | | SE_05852 | chr10:22898163-22913491 | Brain_Hippocampus_Middle | | SE_06702 | chr10:22891742-22925122 | Brain_Hippocampus_Middle_150 | | SE_07788 | chr10:22892054-22927185 | Brain_Inferior_Temporal_Lobe | | SE_09886 | chr10:22903801-22907187 | CD14 | | SE_10492 | chr10:22903840-22905939 | CD19_Primary | | SE_10980 | chr10:22884677-22911330 | CD20 | | SE_11828 | chr10:22903692-22905874 | CD3 | | SE_14388 | chr10:22903853-22906056 | CD4_Memory_Primary_7pool | | SE_16302 | chr10:22903655-22906078 | CD4_Naive_Primary_8pool | | SE_17834 | chr10:22892759-22908318 | CD4p_CD25-_CD45ROp_Memory | | SE_18302 | chr10:22897230-22908166 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_19467 | chr10:22904349-22905913 | CD4p_CD25-_Il17p_PMAstim_Th17 | | SE_19976 | chr10:22883491-22928570 | CD56 | | SE_20756 | chr10:22903718-22906013 | CD8_Memory_7pool | | SE_22003 | chr10:22903623-22905768 | CD8_Naive_8pool | | SE_22289 | chr10:22885022-22948957 | CD8_primiary | | SE_32693 | chr10:22903816-22905972 | GM12878 | | SE_52957 | chr10:22904521-22905576 | Small_Intestine | | SE_54406 | chr10:22904547-22905617 | Spleen | | SE_62312 | chr10:22885182-22974515 | Tonsil |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH10I022596 | chr10 | 22885169 | 22927443 |
|
Enhancer Sequence | GGTTTTTGAG TTTATTAAAA TTTTCTTAGG TTAGCTGAAC AAAGTGAAAG CACCAGTTAT 60
ACTATCACAT ACAGGCCACC TTTAAGGTTC CTTCAGGTTG CAAATATTCA ATAAAATTCT 120
CACAGCAAAA GAGCAATATC ACTTTACACT TAATGGTTGT CAAATACTTA ATGGTTGTCA 180
ATCCCCTTTG GCAAACACAG TATAGTTCTC TCTGTACTGC TGGTCACACT CACAGGCCTG 240
TAAAACAAGT GTATTAGAAA TTCCCCGCCC CACACAGAGT GGCTGGAGCC TGGGGCCCCA 300
GGGCATCCTG GGAGCGACTT CTTGTTCCTG TTTATGCCGG ACTTCTTGTT CCTGTTTATG 360
CCGTGCCAGT CACCCCCAAA TTGCAGGTGT GGGTCTGCAC TGCCTTGCTG CCCGGCCATT 420
GGGCATCAAA GCTGCCCATG CTGGGGCTCC AAAGATGACA TAAAATAAAG CAGCTTTGTT 480
GTCTGCATCA ATAGAAACAG GGTCAAACGG GGCGGAGAGG GCTAGTGCAG AGCGCCAAAA 540
TGTCCCTGAT TATGGTATGA CTCAAGAGTG GGGGCAGGGG AGAGAGCAGA GGGGGAGCTG 600
ACATGTGGCA GGGAGAGGGA GGAAGCCGGG GAGAGCTCCT CAGGCTTGGC TCAGCTTTAC 660
CCTAACTCAC TGCCACACTT GGCACTAACC TTACGGCTCA TGCTAGGTGC ACATGTGCCA 720
AGACCCACGT GAGGCACTCC ACACACAGTA TCTTATCTGA TCTTTACAAC CCAAGGGGGT 780
AGAGGTGCTA TTATCATGCC CATTACACAG ATAAGGAAAT TGAGGCTTAG TGAGATTAGA 840
AAAGGCCCAA GCTATTAAAC AGTAGAGCTG TACCTGGAAC TCAGTCCAAT 890
|
