Tag | Content |
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EnhancerAtlas ID | HS120-00698 |
Organism | Homo sapiens |
Tissue/cell | LNCaP-abl |
Coordinate | chr1:234679260-234681220 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
EWSR1-FLI1 | MA0149.1 | chr1:234680291-234680309 | GGAGGGAGGGAGGGAGGG | + | 6.03 | EWSR1-FLI1 | MA0149.1 | chr1:234680263-234680281 | GGCTGGAAGGAAGGAGGG | + | 6.65 | MNX1 | MA0707.1 | chr1:234679648-234679658 | GGTAATTAAA | + | 6.02 | ZNF263 | MA0528.1 | chr1:234680272-234680293 | GAAGGAGGGTGCAGGAGAGGG | + | 6.23 | ZNF263 | MA0528.1 | chr1:234680239-234680260 | GGAGGCGGTGGAGGGAGAGGG | + | 6.32 | ZNF263 | MA0528.1 | chr1:234680279-234680300 | GGTGCAGGAGAGGGAGGGAGG | + | 6.88 | ZNF263 | MA0528.1 | chr1:234680288-234680309 | GAGGGAGGGAGGGAGGGAGGG | + | 7.97 |
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| Number of super-enhancer constituents: 39 | ID | Coordinate | Tissue/cell |
SE_00256 | chr1:234678894-234681407 | Adipose_Nuclei | SE_02030 | chr1:234679180-234680303 | Aorta | SE_03087 | chr1:234679317-234680349 | Bladder | SE_03087 | chr1:234680449-234681335 | Bladder | SE_03277 | chr1:234677242-234682205 | Brain_Angular_Gyrus | SE_03881 | chr1:234666237-234682343 | Brain_Anterior_Caudate | SE_04834 | chr1:234675109-234683583 | Brain_Cingulate_Gyrus | SE_06031 | chr1:234663344-234683729 | Brain_Hippocampus_Middle | SE_06706 | chr1:234675770-234683578 | Brain_Hippocampus_Middle_150 | SE_07941 | chr1:234666334-234683583 | Brain_Inferior_Temporal_Lobe | SE_08855 | chr1:234678846-234680147 | Brain_Mid_Frontal_Lobe | SE_08855 | chr1:234680929-234681472 | Brain_Mid_Frontal_Lobe | SE_25723 | chr1:234678741-234681613 | DND41 | SE_25924 | chr1:234678420-234682356 | Duodenum_Smooth_Muscle | SE_26846 | chr1:234679054-234681504 | Esophagus | SE_27803 | chr1:234678191-234683432 | Fetal_Intestine | SE_28730 | chr1:234677573-234683566 | Fetal_Intestine_Large | SE_29594 | chr1:234678966-234682192 | Fetal_Muscle | SE_32368 | chr1:234679147-234681464 | Gastric | SE_33599 | chr1:234678001-234683588 | H2171 | SE_33857 | chr1:234679138-234681289 | HCC1954 | SE_40608 | chr1:234665473-234682184 | Left_Ventricle | SE_42030 | chr1:234679016-234681388 | LNCaP | SE_42375 | chr1:234677866-234682213 | Lung | SE_45860 | chr1:234679090-234681231 | Osteoblasts | SE_47023 | chr1:234679109-234680347 | Ovary | SE_47023 | chr1:234680465-234681401 | Ovary | SE_47805 | chr1:234679174-234679696 | Pancreas | SE_47805 | chr1:234679712-234680429 | Pancreas | SE_47805 | chr1:234680482-234681400 | Pancreas | SE_48212 | chr1:234666321-234682043 | Psoas_Muscle | SE_48672 | chr1:234678919-234682209 | Right_Atrium | SE_49707 | chr1:234679291-234680369 | Right_Ventricle | SE_49707 | chr1:234680512-234681403 | Right_Ventricle | SE_51126 | chr1:234677396-234682455 | Skeletal_Muscle | SE_54537 | chr1:234666303-234682504 | Stomach_Smooth_Muscle | SE_61054 | chr1:234622432-234680799 | HBL1 | SE_61473 | chr1:234622384-234680928 | Toledo | SE_68387 | chr1:234634206-234681763 | TC32 |
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| Number: 1 | ID | Chromosome | Start | End |
GH01I234527 | chr1 | 234663203 | 234683328 |
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Enhancer Sequence | GGGAGAAAGG CCAGTTGCAG TCAGTGTCAC GGTGCTGTTT TTGAAACTCT GCAGGTCCCT 60 CATAGGCCGG CTGATATCAC CCATGCCAGG ATTGCTTGGC CTTGACAGAG CCTGTGTTAG 120 AAGGGACTAT CATGAAGGTA TCCAAGATAC TAAAGGGCTG AAACAAGCCC CTCTCTTGTC 180 TTCACAGTAT CTTCCAGTGG CAGACAGGAG GCCACTGGAT GAAGCTGAGG ACAAATAAAT 240 GTCAATAAAC CACCACTGGG AGCTGCTGCT CCCCCATTTC CCGTGGCCTG CAGGGGGTCA 300 CTGAGTTAAA TGTTACAGCT GATTGTGAAA GGGACCTGGT GAATCCATGA TCAATAATGA 360 CATTGGTTTT TACACGAGCT AAGATAAGGG TAATTAAATC TTGTGCTTCA GGCCATATAA 420 ACTGATCTCC ACAGGAGGGC AAGAATTAAT TTAATTCCAC ACACACAACC CCTTCCAACC 480 CCTCTGACAG CTTTAGTATA ATGGACTCAG TGCAGGATGG GGAAGATAGA GCACCAGGTA 540 TTAACCACCA CACCTATCGG GAGCTTGAAC TTGATGGGCC TCGTGGCTGA TCCAGGGCAG 600 CAAATCCAGA GCTGCTTACA GCTTCTCTCT GTGCTGGGTT TATTACATAC AATCTGTACA 660 GGGGCTGTTT CCACACTTAA TGGCAGTCCT GAATCACTAT CTATTTCCCA TCCTTGCCTG 720 CAAAACAGCA ACCCAGAGCT AGTGCTATGC CGTCAATACC GGGCCCCATA AAGCCACTGC 780 TGTATAGATT TGCCTTTTTG TGCATGTGCG TCTGATTCAC GAGCACTTTG GCAGCCTTCC 840 AGGCTTGAGG AGAGGAAAAA AACATCCTGA GCATCCCAAC AGCCTCATTT TGATCTGTGA 900 TACTGAGCAA CTCATTTCCA CTTCACAGGC TCTGCTGAGC TGTGCCACAG AAAGACAAAT 960 CCCAGATGTG GCAGGGGTGG GAGGCGGTGG AGGGAGAGGG GCTGGCTGGA AGGAAGGAGG 1020 GTGCAGGAGA GGGAGGGAGG GAGGGAGGGC CAAGGGAAGG GAGGGAAGAT GAAAGCAGAA 1080 AAGGGCCACA TTTATTAAGC TGTTTTTCTT TTGGTGAAAA GAAGCATTTA TCAGTGATTT 1140 CATATATCAT GTGAGAGGTG GCTTCCTGCC AATTTCCAAG AATCCAAACA ACCCGCTGAC 1200 ATCATATGCT AAATATAGCT CAGGCTTTGC TTTAGGTGAA CAAATAATGC CGCTGGACAG 1260 GAATAGGTTC TCTTCAGTTA CATGGTTATT ATGATCGGCT GTCAGGCTTG TGTAATCAAA 1320 AGAATCATGT CCAGTTCCAA GGAGGAATGG TGCAAAGAAC TCATCAAACA ATTTCGGGAG 1380 ATGACTGATG AACCCCCATT CCTCCTGCCT TCCCAGGTGG CCGGCTGAGC CTGGCTGCTG 1440 GAGGAAAGGT GGGCAACTCT GTTGTTGCAG GTCTTCAAAG CCCTGGTGTG TGTGTGTGTG 1500 TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGCGTGCGCT GTATTTCCAC CTCTGCCCTG 1560 CCCATCAGAA AAGGTGGCTG ATCTCTCCAA GGGAAATGCG TAGAAGGAAG ACAGACCTTC 1620 AAACTCACAG ATATGGTGCA GGAGCTATTC ATGAGGCTGG GGCAGGAGCG AGCGGGGTGG 1680 GGTTGGTGGC ACAGATAGTT CAGGCAGTCT GTTTATTCTG CAAGCATTCA GGTAAGGGTG 1740 CTTGTCTGAA GGCAATCGGA GAGCCATCTT CCACGGCTCT TGGGCTCTGG TACTTTTGAT 1800 TCTACCTCCC ATAGCTTTTG TGTTGTGCGT GTCCTGTCCG GGACTGGTGC CTGTCATTCT 1860 GTCTGAAGCC ACCTGAAAGA TTAAGATTCG TAATGAGACC TCTCCCTCCT CTGCCAGCAC 1920 TCTCCTTCTC CCTGCCCACT CCCCCAGGCT CACACTGGGG 1960
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