EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS120-00656

Organism

Homo sapiens

Tissue/cell

LNCaP-abl

Coordinate

chr1:224516880-224517770

Target genes

Number: 9
Name	Ensembl ID

RP11	ENSG00000243000
FBXO28	ENSG00000143756
DEGS1	ENSG00000143753
SNORA72	ENSG00000201898
MIR320B2	ENSG00000221406
NVL	ENSG00000143748
CNIH4	ENSG00000143771
CNIH3	ENSG00000143786
WDR26	ENSG00000162923

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF13	MA0657.1	chr1:224517701-224517719	ACAAAAGGGGAGTGGCAC	-	6.1
ZNF263	MA0528.1	chr1:224517041-224517062	GAGGAAAGAGGAGGAAGGGGA	+	6.02
ZNF263	MA0528.1	chr1:224517044-224517065	GAAAGAGGAGGAAGGGGAGGT	+	6.22
ZNF263	MA0528.1	chr1:224517050-224517071	GGAGGAAGGGGAGGTAAGAGA	+	6.44
ZNF263	MA0528.1	chr1:224517047-224517068	AGAGGAGGAAGGGGAGGTAAG	+	7.29

Enhancer Sequence

GCCACTGCAC TCTAGCCTGG GCAACAGAGC GAGACTATGT CTCAGAAAAA TAAAAATAAA 60
ATGAAATAAA TACATAGATA ATAGAGTATG TAGATACTAC TCAAAGGTTA TTACACTAAA 120
TGAGATCACA TAGGAAGTAT GGATAGATAA GAAAGGTGTA TGAGGAAAGA GGAGGAAGGG 180
GAGGTAAGAG AACAGTGGCA CAGAGCACTT CCAACATTTA CAAGTTGGTA GGAAAAGATG 240
GGTCCGAAAA GGAGATTGTT TAGGGGCTGG TGAAGTGAAA GAAAAACAAG GAGAATGTGT 300
AGCTCACAAA TTCCTAAGTG AAGAAAATTC TCTCCCACCT TTTAACTCAG ACTGCTTGCT 360
TACATTCTGA GGTATTTGCC ACACACTGCT TTTTACTGAT GGTCATGAAA ATGAGAAAAC 420
CGTAGGCAAA GTGCCTGTTA CTGTTGCCAG ACCCATGTTA TCTCGTTTTA GTGTGTAAGT 480
TCCTTGAGAA CGGAAATTAA CATATTATTT ATGCCACCCC TTCTCAAGGA CCTCTTACAA 540
TGCGAGCGTT TGAAGACCAT TCCTGTGCTA ACTTCACAAG CCAAAGAGGT TAAAATTCAA 600
AGGCTACCTC CACTCTACTG AATGATCTGC GCTGAAGACG ACCAGACAAC TTGGGCAGCC 660
CTACCAAGCT GCACCCTCCC ACCATCCCCG GCTTCTCCCT GAGACTCCGC ACCAACGTGG 720
GTAGGGAAGG CCCCGGCAGC ACCAACTAAG GAGAAACAGA CGCACGCCCA GACCCAGACT 780
GGGGAAAGAA GACTAGTTGA GTTCCACCTG GATGCCACCC GACAAAAGGG GAGTGGCACC 840
CTGGGGCAGC GATCGGGGCC CTTGGCGAGG CCAAGCGGTG CAGAATACAC 890