| Tag | Content |
|---|
EnhancerAtlas ID | HS120-00650 |
Organism | Homo sapiens |
Tissue/cell | LNCaP-abl |
Coordinate | chr1:223921610-223922720 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Ar | MA0007.3 | chr1:223922394-223922411 | TGGCACACCATGTACCA | - | 6.01 | | Nr5a2 | MA0505.1 | chr1:223921780-223921795 | GACCTCAAGGCCAGC | + | 6.22 |
|
| | Number of super-enhancer constituents: 25 | ID | Coordinate | Tissue/cell |
| SE_00224 | chr1:223917623-223923297 | Adipose_Nuclei | | SE_01908 | chr1:223920427-223922082 | Aorta | | SE_02306 | chr1:223920308-223921944 | Astrocytes | | SE_04026 | chr1:223920429-223923012 | Brain_Anterior_Caudate | | SE_05036 | chr1:223920530-223922321 | Brain_Cingulate_Gyrus | | SE_05972 | chr1:223920132-223922577 | Brain_Hippocampus_Middle | | SE_07159 | chr1:223920244-223923166 | Brain_Hippocampus_Middle_150 | | SE_07996 | chr1:223920284-223922259 | Brain_Inferior_Temporal_Lobe | | SE_09681 | chr1:223920277-223921825 | CD14 | | SE_19702 | chr1:223921073-223922029 | CD4p_CD25-_Il17p_PMAstim_Th17 | | SE_23408 | chr1:223920555-223922971 | Colon_Crypt_1 | | SE_24051 | chr1:223921499-223922031 | Colon_Crypt_2 | | SE_24051 | chr1:223922112-223922463 | Colon_Crypt_2 | | SE_25230 | chr1:223920636-223922879 | Colon_Crypt_3 | | SE_26209 | chr1:223920732-223921934 | Duodenum_Smooth_Muscle | | SE_26925 | chr1:223921184-223922005 | Esophagus | | SE_31491 | chr1:223920239-223923646 | Gastric | | SE_38254 | chr1:223917692-223922239 | HUVEC | | SE_41495 | chr1:223920316-223922995 | Left_Ventricle | | SE_42269 | chr1:223920225-223923100 | Lung | | SE_49408 | chr1:223920327-223922010 | Right_Atrium | | SE_50365 | chr1:223920440-223922961 | Sigmoid_Colon | | SE_53249 | chr1:223920551-223922027 | Small_Intestine | | SE_65644 | chr1:223920306-223922506 | Pancreatic_islets | | SE_68376 | chr1:223892363-223922876 | TC32 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 2 | Chromosome | Start | End |
| chr1 | 223922041 | 223922091 | | chr1 | 223922066 | 223922385 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I223730 | chr1 | 223917704 | 223922480 |
|
Enhancer Sequence | GGTAAACGTT CCCTGAGAGA ACTGACAGCC CAGGGGTGCA GGGAGAGAAA CGGTCCCAAC 60
TGCAGACTGG GTCCCAACTG CAGACTCGGT CCCAACTGCA GACTCAGGAG GAGGGAGGCT 120
GTTAAGGGGC CGTCTTTCCT TCTGTTATGT GAGGAGAAAA GCAGGGAAGG GACCTCAAGG 180
CCAGCCTCTC CCAGGAGCTG CTGTTCTCAG CCCCGGGATC CAGCGCTACA GGGAAGTGCA 240
GGGGAGGCTC CACAGTCCCG GCTGGAGACC CGGTCAGGCC TGGGTGGCCA CTCTTCTTTG 300
TAGTGGCCAC CCTCGTGTCA CCAGCAAATG CTTTTGTATC TACACCCTTC TCAGTGCTCC 360
CCCTCTTTTA AAAAATGTAC TTTCTTTTTT TAAAAAGAGT TGGGTCTTGC CTTGTCACCT 420
ATGCTGGAGT GCAGTGTTGC TGTCACAGCT CACTGCAAAC TCCACCTCCT GGGCTCAACC 480
CATCCTCCCA CCTCAGCCTC CCAGGTAGCT GGGACCACAG GCACACACCA GGACACCTCG 540
CCCAGTGCTC ACTATTTACC TTTATTTCTT CCTTATTCGG ACACCCCTTG CTTCCAAAGA 600
AGAGTTTCGG AAGGCTCAAG ACGGTGAGAC AGACACCTTA TGCACTGCTT CACTCTCCCC 660
CGCAGCTCCC CTCCCTCCTC ACTGACCCCC GGCCACAACC CTCTCTCCTT GCCCCTCACC 720
AGCCGGCACC CTTGGCAACC CTGGCACCCT TTCGAGGACA AGACTGCCAA ATGTGGCCAA 780
GGTCTGGCAC ACCATGTACC AATCGAAACT CCACTTCCCT TGAGTTTCAG TTTCCACGCC 840
TATAAAATTA GCAAATGAAA AGAGCAAACA CTTGGAGACA CTGTTCTCAA TGCTTTGCAT 900
ATTTTTTTCA TTTAATTCTC AGTGCCATGA GACAGTCTAT TATTATTAAA CCTATGTTAT 960
ATATGAGGAA ACTGAGGCAC AGAGGGAGTA GTTTCCCCAG GTCACAGTCA GGATTTGAAC 1020
TCCATGGTCT GGCTCTAGTG TTTCCCAACC ATTCGGGGTG GGAGTGGGAG AGAAACCAGA 1080
CTGCTCTCCC TAGAAAACAG CATGTGTTTG 1110
|
