| Tag | Content |
|---|
EnhancerAtlas ID | HS120-00598 |
Organism | Homo sapiens |
Tissue/cell | LNCaP-abl |
Coordinate | chr1:205512320-205513170 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| EGR3 | MA0732.1 | chr1:205512737-205512752 | CATGCGGGGGCGGGG | - | 6.26 | | ZNF263 | MA0528.1 | chr1:205512632-205512653 | CTCCTCCTCTTCCCCTCCCTC | - | 6.13 |
|
| | Number of super-enhancer constituents: 4 | ID | Coordinate | Tissue/cell |
| SE_04919 | chr1:205511876-205513696 | Brain_Cingulate_Gyrus | | SE_05883 | chr1:205511960-205513840 | Brain_Hippocampus_Middle | | SE_06802 | chr1:205512193-205513539 | Brain_Hippocampus_Middle_150 | | SE_32092 | chr1:205512157-205513702 | Gastric |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I205543 | chr1 | 205512198 | 205513847 |
|
Enhancer Sequence | AGAGCATGCA CGATTTCCCC ATTTCAGTGG ATGGGGAAAC TGAGGCTTTG GGATTTTGAA 60
CTCCTTGCAC ATGGGAGGTT AAGTGGCAAC ACTTGGCCTC CTACCAGGCA CACCCCTGCC 120
CCAACGCTGT GCACCGTAGG TCAGTAACTC TGAACTGTTT TGTTTGCCAG CTCAGGTTTT 180
AATCCGTTTC AGCATCGGGC CGTGAGCAGT GGCCGCGGGG CTAGCAGGAG AGCCAGAATA 240
AGCAGATTTG GCTTCTAATC TGACTCACCC AACTGGTTCA GAATGCAGCC AAACCGGGGA 300
AATTTGGGTG AGCTCCTCCT CTTCCCCTCC CTCACTTGCT CTCGCAGTTG TCCTCTAGCA 360
CCTCTCTCTA TCCCTCCCTC CCCGTCCCCC CGCCCCACTC CCCCAGCTCT GGGAGCGCAT 420
GCGGGGGCGG GGTCCTAGGA GGATGTGAGC CCATGGACAC GCGGGCGGGA TGTTTTTCTC 480
CTCGTCATTG TTCTCCCATG CCCATTGTGT GCGCTGAGAG CAGCACGTCA CCAAGTCGCC 540
TGGCAGGCTC TCAGCAGAGC TGGGGAATGT TTCCGGAGTG GACTAATCCA TTATGAATGG 600
CCGAAACTTT TTAAAAGCTC TGGCGTTTCT TTGCATGGCC AGACTGGGAG AGCCAAAGAG 660
AAGGAAGGAT TTGGAAACTC CTGGCTTTGA GGCTACAGGT CCCAGGGACC TTGGCAGACC 720
CGTGGTTTGC CAAGAGGGCC TTTCAGACTG GGCCTGCCAC CCAGTGAGGG ATCTAGGAAT 780
GTCACGTGGA GGGGAAATGG CAGGTGGGGC CGTGGATGGA GGGCTCAGCT GGAGGTGTGG 840
AAGGAGTCAA 850
|
