Tag | Content |
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EnhancerAtlas ID | HS120-00580 |
Organism | Homo sapiens |
Tissue/cell | LNCaP-abl |
Coordinate | chr1:202015140-202016720 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
FOXP1 | MA0481.2 | chr1:202015499-202015511 | CTCTGTTTACAT | - | 6.32 | FOXP2 | MA0593.1 | chr1:202015500-202015511 | TCTGTTTACAT | - | 6.02 | Znf423 | MA0116.1 | chr1:202015407-202015422 | GCCCCCCTGGGGTGT | - | 6.21 | Znf423 | MA0116.1 | chr1:202015965-202015980 | GGCACCCTGGGTGGC | + | 6.36 | Znf423 | MA0116.1 | chr1:202015965-202015980 | GGCACCCTGGGTGGC | - | 6.66 |
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| Number of super-enhancer constituents: 21 | ID | Coordinate | Tissue/cell |
SE_23058 | chr1:202014631-202017594 | Colon_Crypt_1 | SE_23723 | chr1:202014745-202017484 | Colon_Crypt_2 | SE_24689 | chr1:202013412-202017599 | Colon_Crypt_3 | SE_25977 | chr1:202013680-202018944 | Duodenum_Smooth_Muscle | SE_26730 | chr1:202014480-202017654 | Esophagus | SE_27624 | chr1:202013379-202018834 | Fetal_Intestine | SE_28545 | chr1:202011166-202018857 | Fetal_Intestine_Large | SE_31432 | chr1:202014570-202017653 | Gastric | SE_33417 | chr1:202013470-202017710 | H2171 | SE_33792 | chr1:202014660-202017539 | HCC1954 | SE_34304 | chr1:202014463-202017386 | HCT-116 | SE_34741 | chr1:202015302-202017356 | HeLa | SE_41626 | chr1:202014836-202016985 | LNCaP | SE_43434 | chr1:202014625-202017551 | MCF-7 | SE_50066 | chr1:202013466-202017590 | Sigmoid_Colon | SE_52354 | chr1:202013521-202017654 | Small_Intestine | SE_56834 | chr1:202014865-202017504 | VACO_400 | SE_57376 | chr1:202014892-202016968 | VACO_503 | SE_57945 | chr1:202014917-202016359 | VACO_9m | SE_57945 | chr1:202016368-202017040 | VACO_9m | SE_65333 | chr1:202014451-202017286 | Pancreatic_islets |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
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| Number: 1 | ID | Chromosome | Start | End |
GH01I202042 | chr1 | 202011209 | 202018712 |
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Enhancer Sequence | CAGGGACAGT GCCAGCAACA GGGACCAGGG AGTGGTGGGA AGGTAAAATA AAGGCAGAGG 60 AAACTTCTCC CAATTGAGGC ACACCTACCC AAGGCCTCTG CCCCTACCCA GACTCCTGAC 120 TTTGACCTGC CTAAAATAAA TCCGGGGTCT GCAAATGGCC TGGAGGCTGC AAATGGCCTG 180 AAGGCTAGTG GTTGGAGGGC AAATAAAGGC AACTCATGGC ACTGCATGCT GCCCCTTGGT 240 GGGCAGGTCC CAGGTCCCAG GGTACCAGCC CCCCTGGGGT GTGATGTGGG CAGCCTCTGA 300 GCTAAGTGAG GTGCAAACAA GAAACCTGGG TTGCCTTTGC CCTCTGTCCG CCCCTTGTCC 360 TCTGTTTACA TCCTCCCTTC CCGTAAATGA GTTGGGTGCT GGGCCCCACT GGCCCTGATC 420 CAGACACACC TGTAGGACAG GTTGGGCAGA GCTCTTGGGG GTGGAGAGCG GGTGGCAGTA 480 CTGGCAGGTG TTTCAGGCCC TTGGGGAGCA AGCTCTGTTC CTTTCCATGG CAGTGCTGCT 540 GCCAGGCTCT TGCTGCCTTG GGCCAGGAAT TCTTGGCCAA CTCCAAAAGG ATGGGATGGC 600 TCTAGGGGGG GCTACCTTGC CCAAGGAGTG CCAGGAAGTT GTGTTCAAGC CCTCAGAGGC 660 AAGAGGACCA AAGGCTCTTT ATCTTCAGTG GGCATTTCCC AGCAGAAATC TGAGGTCTAG 720 AGCGAGACAG AGTAGAATTG ACAATAAGAT CCACACTTGA GCTGCTAGCT GCCTTGATGG 780 GAGACCCCAC TGTAACAAGA TGTCCAGGAG GAGGTGGCGG TACTGGGCAC CCTGGGTGGC 840 TCTGCCTCTC TCTGGACTTT GTTCTGCAGT CAGGTCAGTT GAGGAAGCAA GAGTGAACCT 900 GGAGTTTGGG TTTCTGGAAG GAGCAAGGGG GAAAGGCAGA CTTGGGCAAG GGACATAGGT 960 GTCAGATGAG GCAAGTCTGA GTCAGAAGGC AGAGCCTGTG TCCCAGAGGA AGAGAAACAC 1020 CAGTGTCCAG CCTCCAGGCC ACTTGCAGCC CCCAGATTTA TTTTAGGCAG GTCAAAGTCA 1080 GGAGTCTGGG TAGGGGCAGA GGCCTTGGGT GGGTGTGTCT CAACTCAGAG AAGTTTCCTT 1140 TGCCACCAGA GGATTAACTG ACCAAGTTTA CCTAAGATGT GTTTTCCACC TGATCTCTTC 1200 TGTCTCTCTC AACAACAATG ATGACTGTGT ACTCAGTCAA CAAATATGTA GTAACTGCTT 1260 ACTATGTGCC CAGCCCTTTG CTGGGTGCTT AGATCACAGC TGTGTTCATT GGTGACTTTA 1320 CCAATCCATG GCATCATCTC GGTGGGGCAC TGTCCTGGTC AGCTCCTTCT CCCATTCCCT 1380 CCATCACTCC TCCACCCTCA CCTGCAGCTC CTGCATCTCT TGACTCTCAT CAAATGATCT 1440 TGCTGTCTTC TTCACGGGAA GGCCATGACC TCAAACAGGA AATCCTTCAG TTTCCCACCC 1500 TGCTGAATCT GTACCACCTT CCCTCCAGAG GAGTAGAAGA GGTGTCAACC CTGCCCCCGT 1560 GCTGGCGGTC CCAGTCCTGC 1580
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