EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS120-00461

Organism

Homo sapiens

Tissue/cell

LNCaP-abl

Coordinate

chr1:155011260-155011710

Target genes

Number: 34
Name	Ensembl ID

KCNN3	ENSG00000143603
PMVK	ENSG00000163344
PBXIP1	ENSG00000163346
PYGO2	ENSG00000163348
SHC1	ENSG00000160691
CKS1B	ENSG00000173207
FLAD1	ENSG00000160688
LENEP	ENSG00000163352
ZBTB7B	ENSG00000160685
DCST2	ENSG00000163354
DCST1	ENSG00000163357
RP11	ENSG00000232093
ADAM15	ENSG00000143537
EFNA4	ENSG00000243364
EFNA3	ENSG00000143590
EFNA1	ENSG00000169242
SLC50A1	ENSG00000169241
DPM3	ENSG00000179085
HMGN2P18	ENSG00000223452
TRIM46	ENSG00000163462
KRTCAP2	ENSG00000163463
MUC1	ENSG00000185499
MTX1	ENSG00000173171
THBS3	ENSG00000169231
GBAP1	ENSG00000160766
MTX1P1	ENSG00000236675
GBA	ENSG00000177628
FAM189B	ENSG00000160767
SCAMP3	ENSG00000116521
HCN3	ENSG00000143630
CLK2	ENSG00000176444
FDPS	ENSG00000160752
RUSC1	ENSG00000160753
snoU13	ENSG00000238805

dbSUPER

Number of super-enhancer constituents: 4
ID	Coordinate	Tissue/cell

SE_27386	chr1:155009467-155012322	Esophagus
SE_34218	chr1:155009192-155012322	HCC1954
SE_41765	chr1:155010386-155012291	LNCaP
SE_50747	chr1:155010142-155012182	Sigmoid_Colon

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I155037

chr1

155010431

155011807

Enhancer Sequence

CACTTAGCAC ATCGTGTTGT AGTCACTTGT TTACTCATCT GTCTCTTTCT CTGGATTATG 60
AGCTTCCAGA AGTTCACTGT CTCCTTGCAG AGACCACAGG GAGACACATG TGAAACTGCT 120
AAAACATACC AGGCGGTACA TGACCAAGGG CTAAAATTAG AGGCAGGGAC TGCGAGTGCT 180
GTAGGTGTCT GAGTACTGGG AGTACTGAGG TGGGCTCTGA TCTCTCTTCT GACCATTCTG 240
AGCATGAGCA CCTGTTTCCA GATATTTTCT CTTGCTCTCT CTGCTCCCTC AGCACCTAGG 300
GTCAGTGTCA CTGTAGCCCG GAAAACCTTG GCTTCCTTCC CTAACACAAA CACACACAAG 360
TCAATCATTT GTGGTTTTTT AAGTTCTAGC CATCCCTCTA TGCCCTTCCA GAGACTGGCA 420
CATAGCTAAA CTCTGTGAGT GGCTGCTGAA 450