| Tag | Content |
|---|
EnhancerAtlas ID | HS120-00457 |
Organism | Homo sapiens |
Tissue/cell | LNCaP-abl |
Coordinate | chr1:154399670-154401100 |
Target genes | | Number: 10 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| TCF7L2 | MA0523.1 | chr1:154400148-154400162 | CCCCTTTGATGTCT | - | 6.14 |
|
| | Number of super-enhancer constituents: 29 | ID | Coordinate | Tissue/cell |
| SE_00437 | chr1:154399481-154401751 | Adipose_Nuclei | | SE_01040 | chr1:154399528-154400582 | Adrenal_Gland | | SE_01040 | chr1:154400681-154401626 | Adrenal_Gland | | SE_06653 | chr1:154399347-154403450 | Brain_Hippocampus_Middle | | SE_09189 | chr1:154398672-154408855 | CD14 | | SE_16173 | chr1:154399945-154400671 | CD4_Naive_Primary_7pool | | SE_18405 | chr1:154399517-154407766 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_24531 | chr1:154399580-154400359 | Colon_Crypt_2 | | SE_26130 | chr1:154399302-154401704 | Duodenum_Smooth_Muscle | | SE_26877 | chr1:154399516-154400662 | Esophagus | | SE_26877 | chr1:154400694-154402391 | Esophagus | | SE_32086 | chr1:154399571-154400607 | Gastric | | SE_32086 | chr1:154400656-154401897 | Gastric | | SE_41139 | chr1:154399325-154402156 | Left_Ventricle | | SE_41647 | chr1:154399531-154400535 | LNCaP | | SE_41647 | chr1:154400745-154403911 | LNCaP | | SE_42431 | chr1:154399355-154400656 | Lung | | SE_42431 | chr1:154400696-154402137 | Lung | | SE_47983 | chr1:154399591-154400258 | Pancreas | | SE_47983 | chr1:154400922-154401243 | Pancreas | | SE_48261 | chr1:154399318-154401864 | Psoas_Muscle | | SE_48934 | chr1:154399344-154402194 | Right_Atrium | | SE_50453 | chr1:154399516-154401315 | Sigmoid_Colon | | SE_51380 | chr1:154399138-154401914 | Skeletal_Muscle | | SE_52880 | chr1:154399518-154401631 | Small_Intestine | | SE_54618 | chr1:154399097-154409137 | Stomach_Smooth_Muscle | | SE_62668 | chr1:154357227-154415486 | Tonsil | | SE_65390 | chr1:154399323-154400849 | Pancreatic_islets | | SE_65390 | chr1:154400868-154402476 | Pancreatic_islets |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 3 | Chromosome | Start | End |
| chr1 | 154399696 | 154400530 | | chr1 | 154399716 | 154400696 | | chr1 | 154400830 | 154400990 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I154427 | chr1 | 154399576 | 154401508 |
|
Enhancer Sequence | GGTGTGAGGC CCAGCTGGGA CTCAGATTTT GCTGAGGACC AGGACAGTAC TGTGTGCTGT 60
GTCCTGGCCT TGCAGCAGTG AATGTGTCTC CCGTTTCTCA AGGGCAGGTC TCTGGGATGC 120
CTGACTGTGT CTTCCTTGCC AGTGCCTGGC TGCTGCAGCC TCCTCAAATG TTTATCAAAC 180
ACAGGACTTG CCCACCGTGG GAGAAAGTAA GGCCATAGGT GTCTCAGGAA CCTGCCCAAA 240
CTCGCCTGGC TGCACGGTGA CAATTCAACC AGCTTTCTTA CCCAAGGTCT GTTGGTGACC 300
AGAGAAAACC TTAGATGACC GGCTGCCATG ATGGCCTTAT ATCTGTCCCT TTTCTGCCAG 360
CCTTGAGGTA GAGGGTGCCA GGGAGGAGGA CTCTGGCTCT AGGTGTTAAA GTGAGAGGGA 420
AGTGTGAAGG GTATCTGTAT AGCTAGACAG GGCTCAATGC CAGGCAGAGC TGTCTCCGCC 480
CCTTTGATGT CTATGTCTCT GTCCCTGGAC TGTGGCCAGT AGCCAGTGTG GACTCCAACC 540
TCACCAGCTT TAGGGGTGTT ATCTGCCTGG GAGTCACTGA TCCTTACTCC CTCCTCTGAC 600
AGCCACCTTG GATGGGGTGA AAGGAAGGAC AGCCTGCCAA GTATGAGATA AAAACGCCTC 660
ATAAACAAGA AGGGATTTGC AGGCCAGGCA GAGAGCCTTG TGCTGCTTCT GAGTCCCAGG 720
AGCATGGGCG AGGAGGTGAG GTCAGGCACT CAGCAGCTGC TGGTCCTCTC TGAAATCTTT 780
GGCCAGATTT ATTGCTACTG CTTGCTAATA AATGGTTATG CATTTGGTTC AAAGGACCAA 840
GTGTGCTTAC ATGAAAACTG GCTGTGTTCC CTGGCCTCTG TTTCCTTAGC TGGTTGGACT 900
AATTTGATTG GTTAATAAAT GAGTCCAAGG TGGTTGGGCT AATTTTTATC TTAGATTCTA 960
TGACTCTATA ACTGCTACTC AAAAAAAGTG TACTTGTTCC TTTAATCTTT AATCTTATTT 1020
TTCTTGAGTA GTAGAATACA CCCAATTTTT TTCAAGGGGT AGAGAATGCA TTTTTTTTTT 1080
AACCTTCCAG TTTGGTCCCT AGAGTAAACA CAGCATTGCT GTAGTAGATG TAGGGTACTG 1140
GAGGGAGCAT GGAACAGGGA ACCAGAAGCC CTGGTTCCTA CCCCAGCTGG GCATCTGGGC 1200
CAGTCTCTTG ATTCCTCTGT GCCTCAGTTA CCAACTATAT AACGGGCATT CTGCCATGAA 1260
TACCCTGCGA TTTGGAAACC TCCTGTGTAC GTGTGCACTT GGGTGCCTGG CATTCATTCC 1320
TAATGGCATC CATTCGTTCA CACATTCATC CAGTACTCAG CAGACTCCTG CCATGGGCCA 1380
GGCAACGTCC CGGGCACTTG GAATATAATG GAGAACAAAG CAGGGTGCCT 1430
|
